RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TRBV2A0A0J9YWF9 115 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 IL2RGP31785 369 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 CFHR2P36980 270 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 LMO4P61968 165 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 BTG1P62324 171 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 DOC2BQ14184 412 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 IRF3Q14653 427 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 ZMYND11Q15326 602 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 ZNF826PQ6ZT77 177 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 MOB3CQ70IA8 216 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 LRRC28Q86X40 367 aaPredicted RBP21.1■□□□□ 0.97
LSM6-202ENST00000502781 PDCD1LG2Q9BQ51 273 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 CHST5Q9GZS9 411 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 GSX1Q9H4S2 264 aaPredicted RBP21.1■□□□□ 0.97
LSM6-202ENST00000502781 Q9H521 79 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 TRIM36Q9NQ86 728 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 C1orf123Q9NWV4 160 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 YLPM1P49750 1951 aaKnown RBP21.1■□□□□ 0.97
LSM6-202ENST00000502781 ANKRD61A6NGH8 418 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 A6NIN4 97 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 OR5B21A6NL26 309 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 LY6G6DO95868 133 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 IGHV4-31P0DP07 118 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 WNT4P56705 351 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 GNG3P63215 75 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 TMEM155Q4W5P6 130 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 DMRTC1Q5HYR2 192 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 RBM48Q5RL73 367 aaKnown RBP21.1■□□□□ 0.97
LSM6-202ENST00000502781 PLCXD3Q63HM9 321 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 ADAT3Q96EY9 351 aaPredicted RBP21.1■□□□□ 0.97
LSM6-202ENST00000502781 COMMD4Q9H0A8 199 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 GPR173Q9NS66 373 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 ERVK-18Q9QC07 812 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 ERGIC3Q9Y282 383 aa21.1■□□□□ 0.97
LSM6-202ENST00000502781 A6NLC8 198 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 MYL12BO14950 172 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 LHBP01229 141 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 IRF2P14316 349 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 GPM6AP51674 278 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 FAM201AQ5SY85 155 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 DMKNQ6E0U4 476 aaPredicted RBP21.09■□□□□ 0.97
LSM6-202ENST00000502781 WDR82Q6UXN9 313 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 GCSAMQ8N6F7 178 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 PP6455Q8WZ26 134 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 RGP1Q92546 391 aaPredicted RBP21.09■□□□□ 0.97
LSM6-202ENST00000502781 SMIM19Q96E16 107 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 NARFLQ9H6Q4 476 aa21.09■□□□□ 0.97
LSM6-202ENST00000502781 LSM2Q9Y333 95 aaKnown RBP21.09■□□□□ 0.97
LSM6-202ENST00000502781 ZNF732B4DXR9 585 aa21.08■□□□□ 0.96
LSM6-202ENST00000502781 CDIPTO14735 213 aa21.08■□□□□ 0.96
LSM6-202ENST00000502781 MDH2P40926 338 aaKnown RBP21.08■□□□□ 0.96
LSM6-202ENST00000502781 OR51I2Q9H344 312 aa21.08■□□□□ 0.96
LSM6-202ENST00000502781 TMEM165Q9HC07 324 aa21.08■□□□□ 0.96
LSM6-202ENST00000502781 ABCA2Q9BZC7 2435 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PPIAL4EA0A075B759 164 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PQLC2LA1A4F0 135 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PPIAL4DF5H284 164 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 HEXAP06865 529 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PPIAL4FP0DN26 164 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 GZMKP49863 264 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 TAS2R43P59537 309 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 ACSM1Q08AH1 577 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 UBE2V2Q15819 145 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 CLEC9AQ6UXN8 241 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 UTS2BQ765I0 119 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 SCCPDHQ8NBX0 429 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 FGGYQ96C11 551 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 TECTBQ96PL2 329 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 GAL3ST1Q99999 423 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 MND1Q9BWT6 205 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PPIAL4AQ9Y536 164 aa21.07■□□□□ 0.96
LSM6-202ENST00000502781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.07■□□□□ 0.96
LSM6-202ENST00000502781 ISPDA4D126 451 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 RGS10O43665 173 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 CD5LO43866 347 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 GATBO75879 557 aaKnown RBP21.06■□□□□ 0.96
LSM6-202ENST00000502781 IGHV2-5P01817 119 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 HOXA4Q00056 320 aaPredicted RBP21.06■□□□□ 0.96
LSM6-202ENST00000502781 BDH1Q02338 343 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 KCTD8Q6ZWB6 473 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 PRSS48Q7RTY5 328 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 MUC20Q8N307 709 aaPredicted RBP21.06■□□□□ 0.96
LSM6-202ENST00000502781 OR10Z1Q8NGY1 313 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 RPL3LQ92901 407 aaKnown RBP21.06■□□□□ 0.96
LSM6-202ENST00000502781 PGLYRP3Q96LB9 341 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 ZNF665Q9H7R5 613 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 BLOC1S6Q9UL45 172 aa21.06■□□□□ 0.96
LSM6-202ENST00000502781 ZNF205O95201 554 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 SERPINA3P01011 423 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 MT-ND2P03891 347 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 ZNF404Q494X3 552 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 SPICQ8N5J4 248 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 PARP16Q8N5Y8 322 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 OR13C3Q8NGS6 347 aa21.05■□□□□ 0.96
LSM6-202ENST00000502781 MSI2Q96DH6 328 aaKnown RBP21.05■□□□□ 0.96
LSM6-202ENST00000502781 METTL17Q9H7H0 456 aaPredicted RBP21.05■□□□□ 0.96
LSM6-202ENST00000502781 IGKV1-9A0A0C4DH69 117 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 hCG_1807616A0A1W2PRN6 198 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 SRRM5B3KS81 715 aa21.04■□□□□ 0.96
LSM6-202ENST00000502781 LGALS8O00214 317 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms