RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-219	ENST00000502751	HAVCR2	Q8TDQ0	301 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	FAM216A	Q8WUB2	273 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	APH1B	Q8WW43	257 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	PIGC	Q92535	297 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	SUCNR1	Q9BXA5	334 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	TRIM36	Q9NQ86	728 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	UFSP2	Q9NUQ7	469 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	RNF7	Q9UBF6	113 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	MIOX	Q9UGB7	285 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751	LRCH1	Q9Y2L9	728 aa		13.74	□□□□□ -0.21
LMNA-219	ENST00000502751		A0A1B0GVI7	797 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	TMEM210	A6NLX4	147 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	ZNF850	A8MQ14	1090 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	TRIM77	I1YAP6	450 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	FAM20B	O75063	409 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	CLIC3	O95833	236 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	IGHA1	P01876	353 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	GRP	P07492	148 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	RPSA	P08865	295 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	UBC	P0CG48	685 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	RPS2	P15880	293 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	ACKR3	P25106	362 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	DCK	P27707	260 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	HOXA4	Q00056	320 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	GALE	Q14376	348 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	KCNJ8	Q15842	424 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	TUSC1	Q2TAM9	212 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	LYPD2	Q6UXB3	125 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	KRT74	Q7RTS7	529 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	SYS1	Q8N2H4	156 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	ZDHHC22	Q8N966	263 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	C19orf18	Q8NEA5	215 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	RORB	Q92753	470 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	JMJD8	Q96S16	334 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	ESM1	Q9NQ30	184 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	ACOXL	Q9NUZ1	547 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	OR5V1	Q9UGF6	321 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	PIGL	Q9Y2B2	252 aa		13.73	□□□□□ -0.21
LMNA-219	ENST00000502751	hCG_1807616	A0A1W2PRN6	198 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751		J3QLW9	94 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	SYT7	O43581	403 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	WBP4	O75554	376 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	HTR1A	P08908	422 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	ZNF19	P17023	458 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	ISL1	P61371	349 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	GNB2	P62879	340 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	KCTD8	Q6ZWB6	473 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	OR1M1	Q8NGA1	313 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	OR52I1	Q8NGK6	324 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	PPP1R14A	Q96A00	147 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	DACT3	Q96B18	629 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	ITPKC	Q96DU7	683 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	NEIL1	Q96FI4	390 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	MRI1	Q9BV20	369 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	ALG8	Q9BVK2	526 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	PLEKHA1	Q9HB21	404 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	C1orf123	Q9NWV4	160 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	CHCHD3	Q9NX63	227 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	ZNF69	Q9UC07	566 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	NUP50	Q9UKX7	468 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	SLC22A13	Q9Y226	551 aa		13.72	□□□□□ -0.21
LMNA-219	ENST00000502751	TMEM89	A2RUT3	159 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	HAX1	O00165	279 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	P2RY10	O00398	339 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	MYL12A	P19105	171 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	CCL1	P22362	96 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	CCR9	P51686	369 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	OR12D2	P58182	307 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	CLVS2	Q5SYC1	327 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	TMEM244	Q5VVB8	128 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	FDX2	Q6P4F2	183 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	C12orf54	Q6X4T0	127 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	ZNF841	Q6ZN19	808 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	LHFPL3	Q86UP9	236 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	BCL6B	Q8N143	479 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	CNIH3	Q8TBE1	160 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	RAB40A	Q8WXH6	277 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	OR5P3	Q8WZ94	311 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	TFAP2C	Q92754	450 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	RNF170	Q96K19	258 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	C4orf36	Q96KX1	117 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	JAM3	Q9BX67	310 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	FGF20	Q9NP95	211 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	ERVK13-1	Q9NX77	482 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	MYRF	Q9Y2G1	1151 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751		V9GYS6	101 aa		13.71	□□□□□ -0.21
LMNA-219	ENST00000502751	NBEAL1	Q6ZS30	2694 aa		13.71	□□□□□ -0.22
LMNA-219	ENST00000502751	TENM1	Q9UKZ4	2725 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	KIR2DS1	A0A191URI9	304 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	OR5B21	A6NL26	309 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	TNFRSF13B	O14836	293 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	NRAS	P01111	189 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	PSMB10	P40306	273 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	COMP	P49747	757 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	GBX2	P52951	348 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	GNG3	P63215	75 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	RIPK1	Q13546	671 aa		13.7	□□□□□ -0.22
LMNA-219	ENST00000502751	SMN1	Q16637	294 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms