RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 ZNF607Q96SK3 696 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 CNN2Q99439 309 aaKnown RBP0.25□□□□□ -2.37
SGMS1-205ENST00000498514 HSD17B10Q99714 261 aaKnown RBP0.25□□□□□ -2.37
SGMS1-205ENST00000498514 CHCHD7Q9BUK0 85 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 PORCNQ9H237 461 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 RPF2Q9H7B2 306 aaKnown RBP0.25□□□□□ -2.37
SGMS1-205ENST00000498514 RMND5AQ9H871 391 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 NT5MQ9NPB1 228 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 PARP11Q9NR21 331 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 C21orf62Q9NYP8 219 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 TAS2R1Q9NYW7 299 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 EPS15L1Q9UBC2 864 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 DHCR7Q9UBM7 475 aaKnown RBP0.25□□□□□ -2.37
SGMS1-205ENST00000498514 SNX6Q9UNH7 406 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 PSG8Q9UQ74 426 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 PIGLQ9Y2B2 252 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 MEMO1Q9Y316 297 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 GOLT1BQ9Y3E0 138 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 CHTOPQ9Y3Y2 248 aaKnown RBP0.25□□□□□ -2.37
SGMS1-205ENST00000498514 KCNE3Q9Y6H6 103 aa0.25□□□□□ -2.37
SGMS1-205ENST00000498514 DAPK1P53355 1430 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 KANK1Q14678 1352 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TRAV26-1A0A087WT03 109 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IGHV3-49A0A0A0MS15 119 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 C15orf38-AP3S2A0A0A6YYH1 394 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IGHV1-3A0A0C4DH29 117 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 GLYATL1P3A0A0U1RQE8 302 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 RGSL1A5PLK6 1076 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 LYRM9A8MSI8 78 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 CEACAM18A8MTB9 384 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 D6RAR5 112 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 F6UB75 175 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 SPECC1L-ADORA2AF8WAN1 911 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 HAS3O00219 553 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 MFNGO00587 321 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 DNALI1O14645 258 aaPredicted RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 GOSR2O14653 212 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PRRG1O14668 218 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 NVLO15381 856 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TIMM8AO60220 97 aaPredicted RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 EIF4E2O60573 245 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PLIN3O60664 434 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 EEDO75530 441 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 REM1O75628 298 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 GATBO75879 557 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 OR7A10O76100 309 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 UTS2O95399 124 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 C1orf105O95561 183 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TSPAN12O95859 305 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 LHBP01229 141 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IFNB1P01574 187 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IGHV3-11P01762 117 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 HLA-DQB1P01920 261 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 SMR3BP02814 79 aaPredicted RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IQCF3P0C7M6 154 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 OR8U9P0C7N5 309 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 OR5H8P0DN80 308 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 MCF2P10911 925 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 HSPA5P11021 654 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ERGP11308 486 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 RAB3AP20336 220 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 SPRR2DP22532 72 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PAX7P23759 505 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 FOXN2P32314 431 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 FUSP35637 526 aaKnown RBP eCLIP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 MPV17P39210 176 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 CDKN1BP46527 198 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 GALR1P47211 349 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 RFX3P48380 749 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PRLHRP49683 370 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 CEBPDP49716 269 aaPredicted RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 SSR4P51571 173 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 P2RX1P51575 399 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TAS2R31P59538 309 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 YWHAGP61981 247 aaKnown RBP eCLIP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PPP1CBP62140 327 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 KCNJ2P63252 427 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ACTG2P63267 376 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 HAMPP81172 84 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 MRPS22P82650 360 aaKnown RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 CDK5Q00535 292 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 BIKQ13323 160 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ZNF235Q14590 738 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 IHHQ14623 411 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 RGNQ15493 299 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ZSCAN26Q16670 478 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 SP6Q3SY56 376 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PTPN20Q4JDL3 420 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 LRRC23Q53EV4 343 aaPredicted RBP0.24□□□□□ -2.37
SGMS1-205ENST00000498514 MPV17L2Q567V2 206 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 YIF1BQ5BJH7 314 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 KIAA2026Q5HYC2 2103 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 CFAP157Q5JU67 520 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TEX30Q5JUR7 227 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ATAD3BQ5T9A4 648 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 UBE2UQ5VVX9 321 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 ANKRD26P1Q6NSI1 321 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 PRSS54Q6PEW0 395 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 TMEM205Q6UW68 189 aa0.24□□□□□ -2.37
SGMS1-205ENST00000498514 C12orf54Q6X4T0 127 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms