RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 LINC01560Q8TB33 94 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 LGALS14Q8TCE9 139 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-209ENST00000497564 NRGNQ92686 78 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 WDR12Q9GZL7 423 aaKnown RBP12.15□□□□□ -0.46
VPS26A-209ENST00000497564 LIN7BQ9HAP6 207 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 HMG20AQ9NP66 347 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
VPS26A-209ENST00000497564 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-209ENST00000497564 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 MPC1Q9Y5U8 109 aa12.15□□□□□ -0.46
VPS26A-209ENST00000497564 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.47
VPS26A-209ENST00000497564 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 HPGDSO60760 199 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 PAHP00439 452 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 APOA1P02647 267 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 HCKP08631 526 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
VPS26A-209ENST00000497564 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 KIR2DL3P43628 341 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 FUT6P51993 359 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 ERVS71-1P61550 626 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF45Q02386 682 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 PSG7Q13046 419 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 KISS1Q15726 138 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
VPS26A-209ENST00000497564 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 PIGCQ92535 297 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 CEP19Q96LK0 163 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 CNTD2Q9H8S5 307 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
VPS26A-209ENST00000497564 A0A0B4J203 849 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 LOC100289279A0A1B0GTE1 492 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ATP6V1G2-DDX39BF2Z307 99 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 BPNT1O95861 308 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 OCMP0CE72 109 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF250P15622 560 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PTBP1P26599 531 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 MPV17P39210 176 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 EVX1P49640 407 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 CLDN12P56749 244 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PRDX4Q13162 271 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 UBE2NLQ5JXB2 153 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ALKBH2Q6NS38 261 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 METAP1DQ6UB28 335 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 SAMD12Q8N8I0 201 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PNLDC1Q8NA58 520 aaKnown RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PTX4Q96A99 478 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
VPS26A-209ENST00000497564 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
VPS26A-209ENST00000497564 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 A0A1B0GWJ7 208 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 UBBP0CG47 229 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 NAT2P11245 290 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ELK1P19419 428 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 GCH1P30793 250 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 PEX19P40855 299 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 POU3F4P49335 361 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 RBP2P50120 134 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ZP1P60852 638 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 P2RY14Q15391 338 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM255AQ5JRV8 349 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 OR51D1Q8NGF3 324 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 OR5A2Q8NGI9 324 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ZFAND2BQ8WV99 257 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM171Q8WVE6 324 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 HPSE2Q8WWQ2 592 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 RAB40AQ8WXH6 277 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ITPKCQ96DU7 683 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 DIRAS2Q96HU8 199 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms