RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 EXOSC1Q9Y3B2 195 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-213ENST00000496785 PPIAL4CA0A0B4J2A2 164 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 LOC107986453A0A1B0GWG9 222 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 OOEPA6NGQ2 149 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 GATBO75879 557 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF205O95201 554 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 SERPINA3P01011 423 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 ISG15P05161 165 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 CCDC159P0C7I6 412 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 THBS2P35442 1172 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 GPM6AP51674 278 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 CEP78Q5JTW2 689 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 FAM120AOSQ5T036 256 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 TMEM42Q69YG0 159 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF826PQ6ZT77 177 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 WDR86Q86TI4 376 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 PRSS35Q8N3Z0 413 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 GCSAMQ8N6F7 178 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 BOLLQ8N9W6 283 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 LRRC29Q8WV35 223 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 TFAP2CQ92754 450 aa16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 DIMT1Q9UNQ2 313 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-213ENST00000496785 FN1P02751 2386 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 C2CD3Q4AC94 2353 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 EFCAB10A6NFE3 127 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 A8MXK9 166 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF732B4DXR9 585 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 J3QLI3 93 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 CDIPTO14735 213 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 LHBP01229 141 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 WNT2P09544 360 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 PIPP12273 146 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 MUC1P15941 1255 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 KIR3DL2P43630 455 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 HSPA13P48723 471 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 CSNK2BP67870 215 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 HNRNPA0Q13151 305 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ALKBH1Q13686 389 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 MICBQ29980 383 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 FAM201AQ5SY85 155 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 WDR82Q6UXN9 313 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF573Q86YE8 665 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF676Q8N7Q3 588 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF671Q8TAW3 534 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 PP6455Q8WZ26 134 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 POM121Q96HA1 1249 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 COMMD4Q9H0A8 199 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 PPP1R3EQ9H7J1 279 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 CNOT2Q9NZN8 540 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 FRRS1LQ9P0K9 344 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 OR5V1Q9UGF6 321 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 HHLA2Q9UM44 414 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 SLC7A11Q9UPY5 501 aa16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 CAB39Q9Y376 341 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-213ENST00000496785 ANKRD61A6NGH8 418 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 SRRM5B3KS81 715 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 C3orf80F5H4A9 247 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 FAM157CP0CG43 387 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 CD80P33681 288 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 NPY4RP50391 375 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 GNB2P62879 340 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 LCN2P80188 198 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 RIPK1Q13546 671 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 DCAF12L2Q5VW00 463 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 TEX36Q5VZQ5 186 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 C11orf53Q8IXP5 236 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 SCCPDHQ8NBX0 429 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 DEFB108BQ8NET1 73 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 C12orf43Q96C57 262 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 TMEM80Q96HE8 168 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 SSBP3Q9BWW4 388 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 POLR3KQ9Y2Y1 108 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 MALRD1Q5VYJ5 2156 aa16.11■□□□□ 0.17
CTDSP1-213ENST00000496785 TMEM212A6NML5 194 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 IFNA2P01563 188 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 GNAO1P09471 354 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 LIMS3P0CW19 117 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 LIMS4P0CW20 117 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF20P17024 532 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 SRD5A1P18405 259 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 RBMXP38159 391 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 PITPNBP48739 271 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 TGM4P49221 684 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 AQP4P55087 323 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 CNN3Q15417 329 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 CCDC58Q4VC31 144 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 SFRP4Q6FHJ7 346 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 FBLIM1Q8WUP2 373 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 NRG4Q8WWG1 115 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 RPL3LQ92901 407 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 ZNF649Q9BS31 505 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 CHST5Q9GZS9 411 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 OR51I2Q9H344 312 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 NEK6Q9HC98 313 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 GPR173Q9NS66 373 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 PLCXD1Q9NUJ7 323 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 ERVK-18Q9QC07 812 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 DNAJB11Q9UBS4 358 aa16.1■□□□□ 0.17
CTDSP1-213ENST00000496785 CLN8Q9UBY8 286 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms