RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LEUTXA8MZ59 168 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RFPL4AL1F8VTS6 287 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RP2O75695 350 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 FARS2O95363 451 aaKnown RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 CD8AP01732 235 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 CELA3AP09093 270 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 PATE4P0C8F1 98 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 PPP3CBP16298 524 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 BLVRBP30043 206 aaPredicted RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 CLDN18P56856 261 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 SRSF4Q08170 494 aaKnown RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 ARL6IP1Q15041 203 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 NRN1LQ496H8 165 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 LIN54Q6MZP7 749 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 TMUB2Q71RG4 321 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 GALNTL5Q7Z4T8 443 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 FBXW5Q969U6 566 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 IP6K3Q96PC2 410 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 PECRQ9BY49 303 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 ELL3Q9HB65 397 aaPredicted RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 TUBAL3A6NHL2 446 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 FAM166BA8MTA8 275 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 MRPL33O75394 65 aaKnown RBP11.37□□□□□ -0.59
GARNL3-220ENST00000496711 TNFSF15O95150 251 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF806P0C7X5 589 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 RPA2P15927 270 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF708P17019 499 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 AMY2BP19961 511 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 PRKACBP22694 351 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 RAB14P61106 215 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 IL13RA1P78552 427 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 SRYQ05066 204 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 FGL1Q08830 312 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 ESCO2Q56NI9 601 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 THOC7Q6I9Y2 204 aaKnown RBP11.37□□□□□ -0.59
GARNL3-220ENST00000496711 RTL6Q6ICC9 239 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 LINC00696Q6ZRV3 163 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 SKA3Q8IX90 412 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 OR5H2Q8NGV7 314 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 MARCH1Q8TCQ1 289 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 MITD1Q8WV92 249 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 PHB2Q99623 299 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 RGCCQ9H4X1 137 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 FN3KRPQ9HA64 309 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 ARHGAP21Q5T5U3 1957 aa11.37□□□□□ -0.59
GARNL3-220ENST00000496711 TRAV14DV4A0A0A6YYC5 116 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 CA11O75493 328 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 MAGEA5P43359 124 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 MTCP1P56278 107 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 TAS2R46P59540 309 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 HLXQ14774 488 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-220ENST00000496711 TSPO2Q5TGU0 170 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 ADAD2Q8NCV1 583 aaKnown RBP11.36□□□□□ -0.59
GARNL3-220ENST00000496711 TERB2Q8NHR7 220 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 PDCD10Q9BUL8 212 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 ARL6Q9H0F7 186 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 SLC6A15Q9H2J7 730 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 IL17BQ9UHF5 180 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 MED13Q9UHV7 2174 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 hCG_38984A0A1B0GV85 526 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 EFSO43281 561 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 SYNGR4O95473 234 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 MMP7P09237 267 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM225BP0DP42 221 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 AKR1C4P17516 323 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 HLA-GP17693 338 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 VAMP1P23763 118 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 AGTR1P30556 359 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 PPA1Q15181 289 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 LHFPL2Q6ZUX7 228 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF100Q8IYN0 542 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 Q96M66 194 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 FER1L6-AS2Q96M78 137 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 GSX2Q9BZM3 304 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF230Q9UIE0 474 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-220ENST00000496711 ATPIF1Q9UII2 106 aa11.36□□□□□ -0.59
GARNL3-220ENST00000496711 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
GARNL3-220ENST00000496711 FAM230AA0A1W2PPH8 454 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 CCSO14618 274 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 XRCC2O43543 280 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 DUS4LO95620 317 aaKnown RBP11.35□□□□□ -0.59
GARNL3-220ENST00000496711 IGHV3-9P01782 118 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 FPR2P25090 351 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 SNU13P55769 128 aaKnown RBP11.35□□□□□ -0.59
GARNL3-220ENST00000496711 STK11Q15831 433 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 PABPC1L2AQ5JQF8 200 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM42Q69YG0 159 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms