RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SUPT4H1P63272 117 aaKnown RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 HSF1Q00613 529 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 ANKRD55Q3KP44 614 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 POM121L1PQ3SYA9 428 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 PRSS58Q8IYP2 241 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 SLC26A10Q8NG04 563 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 OR51A4Q8NGJ6 313 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 RBMXL1Q96E39 390 aaKnown RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 ARSGQ96EG1 525 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 KCNK15Q9H427 330 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 FBLN5Q9UBX5 448 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 SRPK3Q9UPE1 567 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 DNAH14Q0VDD8 3507 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 A0A087WV48 116 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 A6NIZ1 184 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 GLOD5A6NK44 160 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 FGF5P12034 268 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 OR10J1P30954 320 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 ECI1P42126 302 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 GPR3P46089 330 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 SLC9A3R2Q15599 337 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 TAF9Q16594 264 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 WDR38Q5JTN6 314 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 GALNTL5Q7Z4T8 443 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 AMZ2Q86W34 360 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 SGPP2Q8IWX5 399 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 SEMA6DQ8NFY4 1073 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 OR2L2Q8NH16 312 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 OR4X1Q8NH49 305 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 JSRP1Q96MG2 331 aaPredicted RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 CMKLR1Q99788 373 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 C20orf144Q9BQM9 153 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 PYGO2Q9BRQ0 406 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 ZDHHC6Q9H6R6 413 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 GSKIPQ9P0R6 139 aa8.04□□□□□ -1.12
HPS4-217ENST00000496385 MRPS18BQ9Y676 258 aaKnown RBP8.04□□□□□ -1.12
HPS4-217ENST00000496385 FEZF1A0PJY2 475 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 SIAH2O43255 324 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 CTSVO60911 334 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 IFNA21P01568 189 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 IL6RP08887 468 aaPredicted RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 SLC35G6P0C7Q6 338 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 COL9A1P20849 921 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 BCKDHBP21953 392 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 GRPRP30550 384 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 NOVA1P51513 510 aaKnown RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 POLR2HP52434 150 aaKnown RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 RND3P61587 244 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 RPS4XP62701 263 aaKnown RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 NKAIN1Q4KMZ8 207 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 EMC4Q5J8M3 183 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 COX18Q8N8Q8 333 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 PLPP7Q8NBV4 271 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 MSL2Q9HCI7 577 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 GPR34Q9UPC5 381 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 KLHDC2Q9Y2U9 406 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 TXNDC12O95881 172 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 C8orf89P0DMQ9 161 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 CLDN6P56747 220 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 CLDN2P57739 230 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 IAH1Q2TAA2 248 aaPredicted RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 DCST2Q5T1A1 773 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 SP5Q6BEB4 398 aaPredicted RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 TEX38Q6PEX7 206 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 KIRREL2Q6UWL6 708 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 P4HA3Q7Z4N8 544 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 CPEB3Q8NE35 698 aaKnown RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 MRGPRDQ8TDS7 321 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 WFIKKN2Q8TEU8 576 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 FGGYQ96C11 551 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 IL17FQ96PD4 163 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 GAL3ST4Q96RP7 486 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 RTBDNQ9BSG5 229 aaPredicted RBP8.03□□□□□ -1.12
HPS4-217ENST00000496385 MENTQ9BUN1 341 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 FLRT3Q9NZU0 649 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 SEMA5BQ9P283 1151 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 SLC25A13Q9UJS0 675 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 WSB1Q9Y6I7 421 aa8.03□□□□□ -1.12
HPS4-217ENST00000496385 GON4LQ3T8J9 2241 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 DHRS7CA6NNS2 312 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 HCRTR2O43614 444 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 CIDEAO60543 219 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 SCAF4O95104 1147 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 HBE1P02100 147 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 NGFRP08138 427 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 IFI6P09912 130 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 PGA3P0DJD8 388 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 HOXB2P14652 356 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 TMEM11P17152 192 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms