RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PECRQ9BY49 303 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 SLC5A7Q9GZV3 580 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 CHRDQ9H2X0 955 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF160Q9HCG1 818 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 LPAR3Q9UBY5 353 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 A0A1W2PQM1 296 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 AQP7P3A6NL99 342 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 DHRS7CA6NNS2 312 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 FOXI3A8MTJ6 420 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-217ENST00000495688 G3V3Y1 287 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 AGPAT2O15120 278 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 LRP3O75074 770 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 CSTBP04080 98 aaKnown RBP11.42□□□□□ -0.58
PTPN7-217ENST00000495688 SERPINA5P05154 406 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 GABRR1P24046 479 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 NFYBP25208 207 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 SPEM2Q0P670 501 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 CCDC157Q569K6 752 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 POC1AQ8NBT0 407 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 OR10Z1Q8NGY1 313 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-217ENST00000495688 C2orf50Q96LR7 162 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 UQCC1Q9NVA1 299 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 B3GALT1Q9Y5Z6 326 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 IGLV3-32A0A0A0MS00 114 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 H7C2Y5 167 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 MSTNO14793 375 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 MBTPS2O43462 519 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 FARS2O95363 451 aaKnown RBP11.41□□□□□ -0.58
PTPN7-217ENST00000495688 MUC1P15941 1255 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-217ENST00000495688 ECH1Q13011 328 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 IL15RAQ13261 267 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 ADPRHL1Q8NDY3 354 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 SPACA9Q96E40 222 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-217ENST00000495688 CNTNAP3BQ96NU0 1288 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 GNRHR2Q96P88 292 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 AQP10Q96PS8 301 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 DEFB126Q9BYW3 111 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 FSCN3Q9NQT6 498 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 SHANK1Q9Y566 2161 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 FBXO24O75426 580 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 LYL1P12980 280 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 NME2P22392 152 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 LPAR6P43657 344 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-217ENST00000495688 CLEC9AQ6UXN8 241 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 MMP26Q9NRE1 261 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 PIGLQ9Y2B2 252 aa11.41□□□□□ -0.58
PTPN7-217ENST00000495688 CHCHD2Q9Y6H1 151 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-217ENST00000495688 ANGPTL7O43827 346 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 PRF1P14222 555 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 GRB2P62993 217 aaKnown RBP11.4□□□□□ -0.58
PTPN7-217ENST00000495688 ENDOGQ14249 297 aaKnown RBP11.4□□□□□ -0.58
PTPN7-217ENST00000495688 KCNMB1Q16558 191 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF385CQ66K41 422 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-217ENST00000495688 NAXEQ8NCW5 288 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 ADAMTS17Q8TE56 1095 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 PARP12Q9H0J9 701 aaKnown RBP11.4□□□□□ -0.58
PTPN7-217ENST00000495688 LIME1Q9H400 295 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 RHOFQ9HBH0 211 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 MLXQ9UH92 298 aa11.4□□□□□ -0.58
PTPN7-217ENST00000495688 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 PNLIPP16233 465 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 PVALBP20472 110 aaPredicted RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 RRADP55042 308 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 PJVKQ0ZLH3 352 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 STK11Q15831 433 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 SNAI3Q3KNW1 292 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 SEMA6DQ8NFY4 1073 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 SHDQ96IW2 340 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 NECAB3Q96P71 396 aaPredicted RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 RBM24Q9BX46 236 aaKnown RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 SMIM3Q9BZL3 60 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 TAF9BQ9HBM6 251 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 RARRES3Q9UL19 164 aa11.4□□□□□ -0.59
PTPN7-217ENST00000495688 CARHSP1Q9Y2V2 147 aaKnown RBP11.4□□□□□ -0.59
PTPN7-217ENST00000495688 MASP2O00187 686 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 MED6O75586 246 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 DHRS3O75911 302 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 DKK1O94907 266 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 IGLV3-1P01715 115 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 HKR1P10072 659 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 ZNF708P17019 499 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 MSR1P21757 451 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 RPL35P42766 123 aaKnown RBP11.39□□□□□ -0.59
PTPN7-217ENST00000495688 CSNK1A1P48729 337 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 TAS2R46P59540 309 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 CCL7P80098 99 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms