RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FEVQ99581 238 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 ZNF816-ZNF321PA0A0X1KG74 233 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 MEIOCA2RUB1 952 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 M0R1W7 72 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 SIGLEC5O15389 551 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 ATP8B1O43520 1251 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 SELENOFO60613 162 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 DCTDP32321 178 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 UBE2E1P51965 193 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 CAV3P56539 151 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 TRIM25Q14258 630 aaKnown RBP18.07■□□□□ 0.48
HDDC3-203ENST00000494993 GK3PQ14409 553 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 NCR3LG1Q68D85 454 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 ZNF454Q8N9F8 522 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 OR8B12Q8NGG6 310 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 GIPC3Q8TF64 312 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 NLKQ9UBE8 527 aa18.07■□□□□ 0.48
HDDC3-203ENST00000494993 A0A1W2PQ09 198 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 B2RBV5 119 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 PRR23D1E9PI22 279 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-203ENST00000494993 ACAA1P09110 424 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-203ENST00000494993 PRR23D2P0DMB1 279 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-203ENST00000494993 NDUFB7P17568 137 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 PSMA6P60900 246 aaKnown RBP18.06■□□□□ 0.48
HDDC3-203ENST00000494993 MS4A2Q01362 244 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 ACSM1Q08AH1 577 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 PLBD1Q6P4A8 553 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 ZDHHC23Q8IYP9 409 aa18.06■□□□□ 0.48
HDDC3-203ENST00000494993 METTL8Q9H825 291 aaKnown RBP18.06■□□□□ 0.48
HDDC3-203ENST00000494993 ARRDC5A6NEK1 342 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 OR2AT4A6NND4 320 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 GLRA1P23415 457 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 GNGT1P63211 74 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 EGR3Q06889 387 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 C2orf68Q2NKX9 166 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 PAPD5Q8NDF8 572 aaKnown RBP18.05■□□□□ 0.48
HDDC3-203ENST00000494993 HIST1H2AAQ96QV6 131 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 NIPAL2Q9H841 368 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 KLHDC2Q9Y2U9 406 aa18.05■□□□□ 0.48
HDDC3-203ENST00000494993 ANKRD61A6NGH8 418 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 PRODHO43272 600 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 RHBDL1O75783 438 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 RAP2AP10114 183 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 POU1F1P28069 291 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 GABRA2P47869 451 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 GPM6AP51674 278 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 BLMHQ13867 455 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 GINS1Q14691 196 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 BEND2Q8NDZ0 799 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 FAM110DQ8TAY7 271 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-203ENST00000494993 DUS3LQ96G46 650 aaKnown RBP18.04■□□□□ 0.48
HDDC3-203ENST00000494993 PPA2Q9H2U2 334 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 ELL3Q9HB65 397 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-203ENST00000494993 TAS2R1Q9NYW7 299 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 LRP12Q9Y561 859 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 PLXNB1O43157 2135 aa18.04■□□□□ 0.48
HDDC3-203ENST00000494993 IGKV1D-17A0A075B6S4 117 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 CST1P01037 141 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 GYS2P54840 703 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 SLC35E4Q6ICL7 350 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 HCP5Q6MZN7 132 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 KRT74Q7RTS7 529 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 C1QL4Q86Z23 238 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 FAM81AQ8TBF8 368 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 FBLN5Q9UBX5 448 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 ZNF222Q9UK12 451 aa18.03■□□□□ 0.48
HDDC3-203ENST00000494993 ZNF732B4DXR9 585 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 H3BUX3 64 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 PSG2P11465 335 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 MAP2K3P46734 347 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 GNG3P63215 75 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 SLC35D3Q5M8T2 416 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 KRT77Q7Z794 578 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 TMEM179BQ7Z7N9 219 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 CPOQ8IVL8 374 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 ZNRF1Q8ND25 227 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 TMEM185AQ8NFB2 350 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 NSL1Q96IY1 281 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 CHID1Q9BWS9 393 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 OR51I2Q9H344 312 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 SF3B6Q9Y3B4 125 aaKnown RBP18.02■□□□□ 0.48
HDDC3-203ENST00000494993 MAB21L2Q9Y586 359 aa18.02■□□□□ 0.48
HDDC3-203ENST00000494993 TRBV23-1A0A0A0MS06 115 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 H0YAE9 185 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 HMGN1P05114 100 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 CSF1P09603 554 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 ALOX5APP20292 161 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 GABRA5P31644 462 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 CEACAM21Q3KPI0 293 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 CEP78Q5JTW2 689 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 BBS1Q8NFJ9 593 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 OR5D13Q8NGL4 314 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 C17orf50Q8WW18 174 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 ASB9Q96DX5 294 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 LRGUKQ96M69 825 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 SSX3Q99909 188 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 LAMP5Q9UJQ1 280 aa18.01■□□□□ 0.47
HDDC3-203ENST00000494993 DSCAML1Q8TD84 2053 aa18■□□□□ 0.47
HDDC3-203ENST00000494993 A0A0U1RQV5 110 aa18■□□□□ 0.47
HDDC3-203ENST00000494993 OSMP13725 252 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms