RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	TNFRSF1A	P19438	455 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	CFP	P27918	469 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	SDC2	P34741	201 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	ZNF93	P35789	620 aa	Predicted RBP	11.55	□□□□□ -0.56
APTX-231	ENST00000494973	CD200	P41217	278 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	RIN1	Q13671	783 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	UBE2V2	Q15819	145 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	MSMP	Q1L6U9	139 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	SWI5	Q1ZZU3	235 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	CEP78	Q5JTW2	689 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	LRP11	Q86VZ4	500 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	NEUROG1	Q92886	237 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	ELMOD3	Q96FG2	381 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	RNF170	Q96K19	258 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	SORCS2	Q96PQ0	1159 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	GPER1	Q99527	375 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	NAA50	Q9GZZ1	169 aa	Known RBP	11.55	□□□□□ -0.56
APTX-231	ENST00000494973	PCDHB16	Q9NRJ7	776 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	IL19	Q9UHD0	177 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	POLDIP2	Q9Y2S7	368 aa		11.55	□□□□□ -0.56
APTX-231	ENST00000494973	USP9Y	O00507	2555 aa	Predicted RBP	11.54	□□□□□ -0.56
APTX-231	ENST00000494973		A6NIN4	97 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	IFNL4	K9M1U5	179 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	UBB	P0CG47	229 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	MAGEB1	P43366	347 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	RORC	P51449	518 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	MTCP1	P56278	107 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	PRSS12	P56730	875 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	SCAND1	P57086	179 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	LRRTM1	Q86UE6	522 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	JAGN1	Q8N5M9	183 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	OR2Z1	Q8NG97	314 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	OR6M1	Q8NGM8	313 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	KCTD12	Q96CX2	325 aa	Known RBP	11.54	□□□□□ -0.56
APTX-231	ENST00000494973	S100A13	Q99584	98 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	RAB1B	Q9H0U4	201 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	PLGRKT	Q9HBL7	147 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	MSL2	Q9HCI7	577 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	CCDC59	Q9P031	241 aa	Known RBP	11.54	□□□□□ -0.56
APTX-231	ENST00000494973	MYEF2	Q9P2K5	600 aa	Known RBP	11.54	□□□□□ -0.56
APTX-231	ENST00000494973	GHRL	Q9UBU3	117 aa		11.54	□□□□□ -0.56
APTX-231	ENST00000494973	ROS1	P08922	2347 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	IGKV1-9	A0A0C4DH69	117 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	FAM230A	A0A1W2PPH8	454 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	PQLC2L	A1A4F0	135 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ZSCAN5B	A6NJL1	495 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ZNF732	B4DXR9	585 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	AIP	O00170	330 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ZNF780A	O75290	641 aa	Predicted RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	PTBP3	O95758	552 aa	Known RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	DANCR	P0C864	163 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ALDH3B1	P43353	468 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	GATA4	P43694	442 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	TNFAIP6	P98066	277 aa	Predicted RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	DYNC1I2	Q13409	638 aa	Known RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	GPR176	Q14439	515 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	KISS1	Q15726	138 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	FAM189A2	Q15884	450 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ALKBH6	Q3KRA9	238 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ASPHD2	Q6ICH7	369 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973		Q6ZR03	302 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	SAXO1	Q8IYX7	474 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	OR51A2	Q8NGJ7	313 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	HPSE2	Q8WWQ2	592 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	NEU4	Q8WWR8	484 aa	Predicted RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	HPS1	Q92902	700 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	SLC25A46	Q96AG3	418 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	PKIB	Q9C010	78 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	PPIL3	Q9H2H8	161 aa	Known RBP	11.53	□□□□□ -0.56
APTX-231	ENST00000494973	CXorf56	Q9H5V9	222 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	RHOF	Q9HBH0	211 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	DECR2	Q9NUI1	292 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	DOPEY2	Q9Y3R5	2298 aa		11.53	□□□□□ -0.56
APTX-231	ENST00000494973	IFITM5	A6NNB3	132 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973		H7C417	338 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973		J3QT63	122 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	SLC17A2	O00624	439 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	MLNR	O43193	412 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	TPD52L2	O43399	206 aa	Known RBP	11.52	□□□□□ -0.57
APTX-231	ENST00000494973	SPRY3	O43610	288 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	LILRA1	O75019	489 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	IGHV1-46	P01743	117 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	CD37	P11049	281 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	GPM6A	P51674	278 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	BMX	P51813	675 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	MXD1	Q05195	221 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	RAB11B	Q15907	218 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	DGUOK	Q16854	277 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	MST1L	Q2TV78	715 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	FAM76B	Q5HYJ3	339 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	TMEM255A	Q5JRV8	349 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	C1orf100	Q5SVJ3	147 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	C11orf71	Q6IPW1	123 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	SFXN4	Q6P4A7	337 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	MKX	Q8IYA7	352 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973		Q8IYB0	196 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	OR10AD1	Q8NGE0	317 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms