RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 CASP12Q6UXS9 341 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 TEX43Q6ZNM6 134 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
CLHC1-213ENST00000494539 MTERF4Q7Z6M4 381 aaKnown RBP2.18□□□□□ -2.06
CLHC1-213ENST00000494539 HS3ST5Q8IZT8 346 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 CCDC112Q8NEF3 446 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 OR5M1Q8NGP8 315 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 OR2G3Q8NGZ4 309 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 NT5CQ8TCD5 201 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 FAM45AQ8TCE6 357 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 ZFP90Q8TF47 636 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 GEMIN6Q8WXD5 167 aaKnown RBP2.18□□□□□ -2.06
CLHC1-213ENST00000494539 PTH2Q96A98 100 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 PPWD1Q96BP3 646 aaKnown RBP2.18□□□□□ -2.06
CLHC1-213ENST00000494539 GALNT14Q96FL9 552 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 RNF185Q96GF1 192 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 TMEM56Q96MV1 263 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 RDH12Q96NR8 316 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 SMIM14Q96QK8 99 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 TEAD3Q99594 435 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 SDHCQ99643 169 aaPredicted RBP2.18□□□□□ -2.06
CLHC1-213ENST00000494539 GPR22Q99680 433 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 GABARAPL3Q9BY60 117 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 SLC25A22Q9H936 323 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 PLGRKTQ9HBL7 147 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 HRASLSQ9HDD0 168 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 SH2D2AQ9NP31 389 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 CCL28Q9NRJ3 127 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 RGS18Q9NS28 235 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 TAS2R9Q9NYW1 312 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 MTFP1Q9UDX5 166 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 VAX2Q9UIW0 290 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 CEMIPQ8WUJ3 1361 aa2.18□□□□□ -2.06
CLHC1-213ENST00000494539 TRAV8-4A0A0B4J246 113 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 ISPDA4D126 451 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 GJE1A6NN92 205 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 OR2AT4A6NND4 320 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 F5H768 121 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 H3BNH8 94 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 M0R036 132 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TGOLN2O43493 480 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RDH16O75452 317 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SEMA3DO95025 777 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 PTHP01270 115 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 P01737 135 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 IGHV3-23P01764 117 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CCDC166P0CW27 439 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 C8orf88P0DMB2 117 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 ICAM2P13598 275 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 NQO1P15559 274 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RAB3BP20337 219 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 PVALBP20472 110 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RPS9P46781 194 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CAV2P51636 162 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 NCBP2P52298 156 aaKnown RBP eCLIP2.17□□□□□ -2.061e-7■■■□□ 15
CLHC1-213ENST00000494539 ZNF138P52744 262 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 DIO3P55073 304 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CLDN12P56749 244 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CKAP4Q07065 602 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SMARCB1Q12824 385 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TSPAN31Q12999 210 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 MLLT11Q13015 90 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 ZNF266Q14584 549 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 PON3Q15166 354 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RFX4Q33E94 735 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CDNFQ49AH0 187 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TFDP3Q5H9I0 405 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 CASC10Q5T4H9 136 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SYPL2Q5VXT5 272 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 LPCAT4Q643R3 524 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 STEAP4Q687X5 459 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 THOC7Q6I9Y2 204 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TTC33Q6PID6 262 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 LINC00173Q6ZV60 143 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 MOB1BQ7L9L4 216 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 HSD17B13Q7Z5P4 300 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 STX12Q86Y82 276 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 C10orf67Q8IYJ2 551 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 BLIDQ8IZY5 108 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TMEM61Q8N0U2 210 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 FAM71E2Q8N5Q1 922 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 METTL13Q8N6R0 699 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 C11orf72Q8NBR9 251 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 ACTL9Q8TC94 416 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 LRRC29Q8WV35 223 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RXFP2Q8WXD0 754 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 RGP1Q92546 391 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 LRRC58Q96CX6 371 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SMIM19Q96E16 107 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 MRAP2Q96G30 205 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 C16orf74Q96GX8 76 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 POLR2J2Q9GZM3 115 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SLIRPQ9GZT3 109 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 POLR2J3Q9H1A7 115 aaKnown RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 LHX5Q9H2C1 402 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 MFSD1Q9H3U5 465 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 TRIM45Q9H8W5 580 aaPredicted RBP2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SLC40A1Q9NP59 571 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 FGFR1OP2Q9NVK5 253 aa2.17□□□□□ -2.06
CLHC1-213ENST00000494539 SLC22A13Q9Y226 551 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms