RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PHF1O43189 567 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 B3GALNT1O75752 331 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PNPP00491 289 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 YES1P07947 543 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PABPC4LP0CB38 370 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 H2AFXP16104 143 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ADRA2CP18825 462 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 GGT1P19440 569 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PGCP20142 388 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PSMB1P20618 241 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ACHEP22303 614 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ELK4P28324 431 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RPS27P42677 84 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MAGEB1P43366 347 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 GPR4P46093 362 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 GZMMP51124 257 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 POLR2HP52434 150 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PSMD4P55036 377 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 BIDP55957 195 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 DLX1P56177 255 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 LYZP61626 148 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RPS4XP62701 263 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ELF3P78545 371 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 CDK6Q00534 326 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SNTB2Q13425 540 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SLC17A1Q14916 467 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RGNQ15493 299 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OR1Q1Q15612 314 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 BCL2A1Q16548 175 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 CYP51A1Q16850 503 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC23Q53EV4 343 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 BEX5Q5H9J7 111 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ATAD3BQ5T9A4 648 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 AGBL2Q5U5Z8 902 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 C1orf140Q5VVS0 124 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 FBXW9Q5XUX1 488 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OLFML2AQ68BL7 652 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OR2A2Q6IF42 318 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 UGT2A3Q6UWM9 527 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC74BQ6ZQY2 392 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 DNM1P46Q6ZS02 220 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 Q6ZT83 130 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RFPL4BQ6ZWI9 263 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 EIF3MQ7L2H7 374 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TSEN54Q7Z6J9 526 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RANBP3LQ86VV4 465 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM123Q8N131 208 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 PARP8Q8N3A8 854 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC18Q8N456 261 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 LINC00471Q8N535 108 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ARL6IP6Q8N6S5 226 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 THAP8Q8NA92 274 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SYT14Q8NB59 555 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ICA1LQ8NDH6 482 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OR13C2Q8NGS9 318 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 DYDC1Q8WWB3 177 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 C22orf15Q8WYQ4 148 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ST8SIA1Q92185 356 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 CORO2AQ92828 525 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 YIPF5Q969M3 257 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 CPNE4Q96A23 557 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 RCN3Q96D15 328 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 C2orf48Q96LS8 159 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OR2M2Q96R28 347 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ATP6V0BQ99437 205 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MCHR1Q99705 422 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SH3GL3Q99963 347 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 REG4Q9BYZ8 158 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MRPL37Q9BZE1 423 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 FAM107BQ9H098 131 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MEPEQ9NQ76 525 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SLC17A5Q9NRA2 495 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 EXD2Q9NVH0 621 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 NKIRAS1Q9NYS0 192 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF226Q9NYT6 803 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 P2RX2Q9UBL9 471 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 IL20RAQ9UHF4 553 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MRTO4Q9UKD2 239 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TMED5Q9Y3A6 229 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MRPS18CQ9Y3D5 142 aaKnown RBP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TMED3Q9Y3Q3 217 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 SELENOKQ9Y6D0 94 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 MXRA5Q9NR99 2828 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 FBN1P35555 2871 aaKnown RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 A0A087WUJ7 227 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 IGHV2OR16-5A0A0B4J2B6 119 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 A0A0B4J2E0 115 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 LOC100653049A0A140TA62 436 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MDFIC2A0A1B0GVS7 189 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 A0A1B0GX12 115 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 OR6C65A6NJZ3 312 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 C5orf58C9J3I9 102 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 H3BNH8 94 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 hCG_2039718K7EN88 272 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 M0QX08 132 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 MRASO14807 208 aa2.34□□□□□ -2.03
PTCD3-218ENST00000493430 SPRY1O43609 319 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-218ENST00000493430 EIF4E2O60573 245 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms