RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 C22orf46C9J442 243 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 TOX4O94842 621 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 LHBP01229 141 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 HLA-DQA2P01906 255 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 SEMG1P04279 462 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 MELTFP08582 738 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 MUC1P15941 1255 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-212ENST00000492407 NCK1P16333 377 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 GRK5P34947 590 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 HMGA2P52926 109 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 DEFA6Q01524 100 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 TSPAN31Q12999 210 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 HNRNPA0Q13151 305 aaKnown RBP7.57□□□□□ -1.2
HDAC3-212ENST00000492407 GALEQ14376 348 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 PCK2Q16822 640 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 TEX36Q5VZQ5 186 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 LDLRAD3Q86YD5 345 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 OR4K13Q8NH42 304 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 OR52J3Q8NH60 311 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 GNPDA2Q8TDQ7 276 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 CHPT1Q8WUD6 406 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 WFDC12Q8WWY7 111 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 SPSB4Q96A44 273 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 WDFY2Q96P53 400 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 DDOQ99489 341 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 PCGF1Q9BSM1 259 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 WDR76Q9H967 626 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 RNPEPL1Q9HAU8 725 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 PLCXD1Q9NUJ7 323 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 ACOXLQ9NUZ1 547 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 MAGEL2Q9UJ55 1249 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 KPTNQ9Y664 436 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 IGHV1-69DA0A0B4J2H0 117 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 A0A0U1RQV5 110 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 GGT3PA6NGU5 568 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 F8W036 122 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 ADAM20O43506 726 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 XRCC2O43543 280 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 OR10H3O60404 316 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CLPXO76031 633 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 IGHV1-69P01742 117 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 HSD17B1P14061 328 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CA6P23280 308 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 RBMXP38159 391 aaKnown RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 IER3P46695 156 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 MPPED2Q15777 294 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 FAM201AQ5SY85 155 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 PRAMEF6Q5VXH4 476 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 OTPQ5XKR4 325 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 SLC25A24Q6NUK1 477 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 METAP1DQ6UB28 335 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 GDPGP1Q6ZNW5 385 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 NAA40Q86UY6 237 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 LINC00346Q8IVM7 164 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 ADGRG5Q8IZF4 528 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 OR52L1Q8NGH7 329 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 GIPC3Q8TF64 312 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CAPSLQ8WWF8 208 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 RFT1Q96AA3 541 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 PHF21AQ96BD5 680 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 C12orf43Q96C57 262 aaKnown RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 MAP6Q96JE9 813 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 TECTBQ96PL2 329 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CCT8L2Q96SF2 557 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 TBX15Q96SF7 602 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 ADAT1Q9BUB4 502 aaKnown RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CHIAQ9BZP6 476 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 SIRPDQ9H106 197 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 MMP27Q9H306 513 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 DPAGT1Q9H3H5 408 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 TOR3AQ9H497 397 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CNTD2Q9H8S5 307 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 IL1RAPQ9NPH3 570 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 ZC4H2Q9NQZ6 224 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 UFSP2Q9NUQ7 469 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 MRPL22Q9NWU5 206 aaKnown RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 C1orf123Q9NWV4 160 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CTSZQ9UBR2 303 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 BAIAP2Q9UQB8 552 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 SOX21Q9Y651 276 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-212ENST00000492407 CDH10Q9Y6N8 788 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 ARHGAP32A7KAX9 2087 aa7.56□□□□□ -1.2
HDAC3-212ENST00000492407 A0A0G2JK05 382 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 IGHV3-64DA0A0J9YX35 117 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 A0A1B0GVI7 797 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 MDFIC2A0A1B0GVS7 189 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 BHLHE40O14503 412 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 SLC25A17O43808 307 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 FABP3P05413 133 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 OCM2P0CE71 109 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 OCMP0CE72 109 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 FMO3P31513 532 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 NAA10P41227 235 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 SLC25A1P53007 311 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 PRRX1P54821 245 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 GRB2P62993 217 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms