RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ALDH3A2P51648 485 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 EGR3Q06889 387 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 SLC9A3R2Q15599 337 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 WDR38Q5JTN6 314 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF684Q5T5D7 378 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 KRT74Q7RTS7 529 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 TCEANCQ8N8B7 351 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 BBS1Q8NFJ9 593 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 OR8B12Q8NGG6 310 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 NPRL2Q8WTW4 380 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 SSMEM1Q8WWF3 244 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 H1FXQ92522 213 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 OR8B4Q96RC9 309 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 C9orf16Q9BUW7 83 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ADI1Q9BV57 179 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF747Q9BV97 191 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 PBOV1Q9GZY1 135 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 TLNRD1Q9H1K6 362 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 SEMA6AQ9H2E6 1030 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 RASSF4Q9H2L5 321 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ACOXLQ9NUZ1 547 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 CTSZQ9UBR2 303 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 RPUSD1Q9UJJ7 312 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 CCDC182A6NF36 153 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 KRT8P05787 483 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 GMFBP60983 142 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 CSNK2BP67870 215 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 IKZF1Q13422 519 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 DEFB112Q30KQ8 113 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 CEACAM21Q3KPI0 293 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 SLC25A30Q5SVS4 291 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 BCL2L15Q5TBC7 163 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 ATPAF1Q5TC12 328 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 MEDAGQ5VYS4 303 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 MOB3CQ70IA8 216 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 LHX4Q969G2 390 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 HRASLS5Q96KN8 279 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 DPAGT1Q9H3H5 408 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 BEX1Q9HBH7 125 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 RASL12Q9NYN1 266 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF319Q9P2F9 582 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 NUFIP1Q9UHK0 495 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 POLDIP2Q9Y2S7 368 aa13.73□□□□□ -0.21
PDLIM2-217ENST00000491330 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 hCG_1809904A0A1W2PP81 198 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1W2PPE2 198 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1W2PQ09 198 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1W2PR64 198 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1W2PRV1 198 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 H3BNX3 289 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 TNFRSF13BO14836 293 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 HOXA3O43365 443 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 MITFO75030 526 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 NDUFB7P17568 137 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 HTR1FP30939 366 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 GABRA2P47869 451 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 GPM6AP51674 278 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 FAM76BQ5HYJ3 339 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 PLCXD3Q63HM9 321 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF573Q86YE8 665 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 EGFL6Q8IUX8 553 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 SLC35F2Q8IXU6 374 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 KIR3DL3Q8N743 410 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 RPL3LQ92901 407 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 C8orf4Q9NR00 106 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 IMPAD1Q9NX62 359 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 NLKQ9UBE8 527 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 PIGLQ9Y2B2 252 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 SNX5Q9Y5X3 404 aa13.72□□□□□ -0.21
PDLIM2-217ENST00000491330 PSMD9O00233 223 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 AKR7A2O43488 359 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 SPRY1O43609 319 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 MPZL2O60487 215 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 DHRS3O75911 302 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 PAHP00439 452 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 NRASP01111 189 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 SFTPBP07988 381 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 OR2T7P0C7T2 308 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 EGR1P18146 543 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 EPHA2P29317 976 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 CAPZA1P52907 286 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 HCCSP53701 268 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 CXCR4P61073 352 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 CLVS2Q5SYC1 327 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 Q6YL49 198 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 C17orf107Q6ZR85 190 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 CCDC54Q8NEL0 328 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms