RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 ZNF391Q9UJN7 358 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 LAMP5Q9UJQ1 280 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 FAM96BQ9Y3D0 163 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 TRRAPQ9Y4A5 3859 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 PSMD9O00233 223 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 NPFFO15130 113 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 MRPL3P09001 348 aaKnown RBP11.2□□□□□ -0.62
COL6A3-211ENST00000491233 FBP1P09467 338 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 ALOX5APP20292 161 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 PRKACGP22612 351 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 DCTDP32321 178 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 GPM6AP51674 278 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 HCCSP53701 268 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 CBX1P83916 185 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 DEFA6Q01524 100 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 GUCA2AQ02747 115 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 APOFQ13790 326 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 TAF9Q16594 264 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 SPATA24Q86W54 205 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 Q8N7P7 452 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 ANGPTL6Q8NI99 470 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 LRTOMTQ8WZ04 291 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 DMRTB1Q96MA1 342 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 TTTY10Q9BZA0 68 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 NLKQ9UBE8 527 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
COL6A3-211ENST00000491233 CAB39Q9Y376 341 aaPredicted RBP11.2□□□□□ -0.62
COL6A3-211ENST00000491233 RNF114Q9Y508 228 aa11.2□□□□□ -0.62
COL6A3-211ENST00000491233 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 A0A1W2PQ09 198 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 OR2AT4A6NND4 320 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 SIGLEC5O15389 551 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 FKBP6O75344 327 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 RHBDL1O75783 438 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 ANXA8P13928 327 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 HOXB6P17509 224 aaKnown RBP11.19□□□□□ -0.62
COL6A3-211ENST00000491233 NDUFB7P17568 137 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 GLRA1P23415 457 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 EEF1B2P24534 225 aaKnown RBP11.19□□□□□ -0.62
COL6A3-211ENST00000491233 MAP2K3P46734 347 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 FLOT2Q14254 428 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 FAM76BQ5HYJ3 339 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
COL6A3-211ENST00000491233 GDPGP1Q6ZNW5 385 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 TRPM8Q7Z2W7 1104 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 PNKDQ8N490 385 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 PAPD5Q8NDF8 572 aaKnown RBP11.19□□□□□ -0.62
COL6A3-211ENST00000491233 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 HIST1H2AAQ96QV6 131 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 ELL3Q9HB65 397 aaPredicted RBP11.19□□□□□ -0.62
COL6A3-211ENST00000491233 FAM206AQ9NX38 181 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
COL6A3-211ENST00000491233 A0A0U1RQV5 110 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 TMEM269A0A1B0GVZ9 245 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 CCDC182A6NF36 153 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 PRR32B1ATL7 298 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 M0QZ24 198 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-211ENST00000491233 SAA4P35542 130 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 GABRA2P47869 451 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 CAV3P56539 151 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 PROK1P58294 105 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 GNG3P63215 75 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 SNAPC1Q16533 368 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 MIDNQ504T8 468 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 LCN1P1Q5VSP4 162 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 KCTD18Q6PI47 426 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-211ENST00000491233 Q6ZSV7 163 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 TMEM185AQ8NFB2 350 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 NPRL2Q8WTW4 380 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 TNFRSF14Q92956 283 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 MED30Q96HR3 178 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 OR51I2Q9H344 312 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 DNAJB9Q9UBS3 223 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 COPS3Q9UNS2 423 aa11.18□□□□□ -0.62
COL6A3-211ENST00000491233 IGKV1D-17A0A075B6S4 117 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 ACOD1A6NK06 481 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 OR5B21A6NL26 309 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 M0R1W7 72 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 TIMM23O14925 209 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 CLPXO76031 633 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 PAHP00439 452 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 PSG2P11465 335 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 FAHP16930 419 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
COL6A3-211ENST00000491233 ZNF829Q3KNS6 432 aaPredicted RBP11.17□□□□□ -0.62
COL6A3-211ENST00000491233 DNAL1Q4LDG9 190 aa11.17□□□□□ -0.62
COL6A3-211ENST00000491233 PDLIM3Q53GG5 364 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms