RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SEM1Q6ZVN7 128 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 ZNF584Q8IVC4 421 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 OR1S1Q8NH92 325 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 FAM57AQ8TBR7 257 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 FOXRED1Q96CU9 486 aaPredicted RBP19.88■□□□□ 0.77
USF3-203ENST00000491165 FAM215AQ9Y5M1 114 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 FLVCR1Q9Y5Y0 555 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 TMEM235A6NFC5 223 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 SLC22A20A6NK97 555 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 FGF2P09038 288 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 UBCP0CG48 685 aaKnown RBP19.88■□□□□ 0.77
USF3-203ENST00000491165 RAB6AP20340 208 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 DAP3P51398 398 aaKnown RBP19.88■□□□□ 0.77
USF3-203ENST00000491165 FMODQ06828 376 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 FGL1Q08830 312 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 PCK2Q16822 640 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 SCGB2B2Q4G0G5 96 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 LINC00346Q8IVM7 164 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 TINAGQ9UJW2 476 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 POLEQ07864 2286 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 SYNGR4O95473 234 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 CD8AP01732 235 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 ABOP16442 354 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 DHRS2Q13268 280 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 MEF2DQ14814 521 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 LPCAT3Q6P1A2 487 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 DEGS2Q6QHC5 323 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 HSD17B13Q7Z5P4 300 aaPredicted RBP19.87■□□□□ 0.77
USF3-203ENST00000491165 ZNF546Q86UE3 836 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 BVESQ8NE79 360 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 OR5M8Q8NGP6 311 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 METTL21EPA6NDL7 271 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 DISC1C4P0D8 188 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 LMX1BO60663 402 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 VAMP5O95183 116 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 EDN3P14138 238 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 BIDP55957 195 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.87■□□□□ 0.77
USF3-203ENST00000491165 LYPD6Q86Y78 171 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 TUSC5Q8IXB3 177 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 ACBD4Q8NC06 268 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 OR4D6Q8NGJ1 314 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 SLC6A7Q99884 636 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 PRRG4Q9BZD6 226 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 SHARPINQ9H0F6 387 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 RNF122Q9H9V4 155 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 GDF2Q9UK05 429 aaPredicted RBP19.87■□□□□ 0.77
USF3-203ENST00000491165 ZNF835Q9Y2P0 537 aa19.87■□□□□ 0.77
USF3-203ENST00000491165 A0A0D9SG52 128 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 A0A1B0GTI1 187 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 AHRRA9YTQ3 701 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 P2RY10O00398 339 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 RLN2P04090 185 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 PRB1P04280 392 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 UBBP0CG47 229 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 MGMTP16455 207 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 CD34P28906 385 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 CLDN17P56750 224 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 RPS27AP62979 156 aaKnown RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 UBA52P62987 128 aaKnown RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 RAB12Q6IQ22 244 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 DOLPP1Q86YN1 238 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 C9orf106Q8NAJ2 232 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 OR13C8Q8NGS7 320 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 AQP3Q92482 292 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 DMRTA2Q96SC8 542 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 SF3B5Q9BWJ5 86 aaKnown RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 ZNF230Q9UIE0 474 aaPredicted RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 RAB22AQ9UL26 194 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 CHD6Q8TD26 2715 aa19.86■□□□□ 0.77
USF3-203ENST00000491165 INTS1Q8N201 2190 aaKnown RBP19.86■□□□□ 0.77
USF3-203ENST00000491165 H2BFMP0C1H6 154 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 LIN54Q6MZP7 749 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 GCNT2Q8N0V5 402 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 KCNK17Q96T54 332 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 RHBDD3Q9Y3P4 386 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 PHF3Q92576 2039 aaKnown RBP19.85■□□□□ 0.77
USF3-203ENST00000491165 OR5H14A6NHG9 310 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 HLA-AP01891 365 aaKnown RBP19.85■□□□□ 0.77
USF3-203ENST00000491165 SRSF4Q08170 494 aaKnown RBP19.85■□□□□ 0.77
USF3-203ENST00000491165 EIF4E3Q8N5X7 224 aaKnown RBP19.85■□□□□ 0.77
USF3-203ENST00000491165 PRRT1Q99946 306 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 SLC25A32Q9H2D1 315 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 CENPMQ9NSP4 180 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 SLC2A8Q9NY64 477 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 NOP16Q9Y3C1 178 aaKnown RBP19.85■□□□□ 0.77
USF3-203ENST00000491165 ZNF175Q9Y473 711 aa19.85■□□□□ 0.77
USF3-203ENST00000491165 ADGRG4Q8IZF6 3080 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 IGKV3D-15A0A087WSY6 115 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 NPIPB13A6NJU9 1138 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 NPIPB4C9JG80 1138 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 LGALS8O00214 317 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 CSN2P05814 226 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 BDKRB2P30411 391 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 RNASE10Q5GAN6 216 aaKnown RBP19.84■□□□□ 0.77
USF3-203ENST00000491165 CORO6Q6QEF8 472 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 OR4S1Q8NGB4 309 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 LHFPL5Q8TAF8 219 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 SH3BGRL2Q9UJC5 107 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms