RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 RNF133Q8WVZ7 376 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 SLAMF9Q96A28 289 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 C1orf147Q96MC9 270 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 ST6GALNAC5Q9BVH7 336 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 PBOV1Q9GZY1 135 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 EHFQ9NZC4 300 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 LSM5Q9Y4Y9 91 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 SPTY2D1-AS1A0A0U1RR47 76 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 BLACEA4D250 179 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 SEC11BP0C7V7 166 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 GP1BBP13224 206 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 RBMXP38159 391 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 RPS10P46783 165 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 CCR5P51681 352 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 AVL9Q8NBF6 648 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 KCNG3Q8TAE7 436 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 TMEM59Q9BXS4 323 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 C19orf12Q9NSK7 152 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 FBXO7Q9Y3I1 522 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 CABIN1Q9Y6J0 2220 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 A0A1W2PP11 408 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 FAM221BA6H8Z2 402 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 GPR37O15354 613 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 NPIPB7O75200 414 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 RAP1AP62834 184 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 CSNK2A1P68400 391 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 CLEC9AQ6UXN8 241 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 TMEM151BQ8IW70 566 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 CSNK2A3Q8NEV1 391 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 PPP4R1LQ9P1A2 415 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 TUBD1Q9UJT1 453 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 TMEM131Q92545 1883 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 TMED7-TICAM2A0A0A6YYA0 188 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 OR13C7P0DN81 318 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 OR3A4PP47883 348 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 SLC37A1P57057 533 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 METTL27Q8N6F8 245 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 OR11A1Q9GZK7 315 aa17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 GAR1Q9NY12 217 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 C14orf166Q9Y224 244 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-206ENST00000490969 MASP2O00187 686 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 ZNF20P17024 532 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 SNU13P55769 128 aaKnown RBP17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 NDUFA6P56556 154 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 TAS2R46P59540 309 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 SLC35A1P78382 337 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 LCN10Q6JVE6 187 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 DNM1P34Q6PK57 102 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 KLHL24Q6TFL4 600 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 ZNF574Q6ZN55 896 aaPredicted RBP17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 GALNTL5Q7Z4T8 443 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 BSCL2Q96G97 398 aaPredicted RBP17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 PBDC1Q9BVG4 233 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 PLEKHA2Q9HB19 425 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 GPR27Q9NS67 375 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 UFSP2Q9NUQ7 469 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 PCNX3Q9H6A9 2034 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 C1QL1O75973 258 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 HSD17B7P56937 341 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 CLINT1Q14677 625 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 GPBAR1Q8TDU6 330 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 MAFIPQ8WZ33 124 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 MARS2Q96GW9 593 aaKnown RBP17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 S100A13Q99584 98 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 PARPBPQ9NWS1 579 aa17.05■□□□□ 0.32
SNAPC3-206ENST00000490969 IGKV1D-43A0A0B4J1Z2 117 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 PGCP20142 388 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 SURF2Q15527 256 aaPredicted RBP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 Q3ZCU0 254 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 OR10H5Q8NGA6 315 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 ADAMTS18Q8TE60 1221 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 GTF3AQ92664 365 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 MR1Q95460 341 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 SGK3Q96BR1 496 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 SLAMF6Q96DU3 332 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 WNT16Q9UBV4 365 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 PUS1Q9Y606 427 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 BORCS7-ASMTA0A0B4J1R7 106 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 SCGB1D2O95969 90 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 TNFP01375 233 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 PRH1P02810 166 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 CHATP28329 748 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 DHPSP49366 369 aaPredicted RBP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 POLR2HP52434 150 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 SUCLG1P53597 346 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 TTLL10Q6ZVT0 673 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 OR5AS1Q8N127 324 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 LILRB2Q8N423 598 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 C14orf144Q96I85 54 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 RHOVQ96L33 236 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 GINS3Q9BRX5 216 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 DOK5Q9P104 306 aa17.04■□□□□ 0.32
SNAPC3-206ENST00000490969 ST8SIA5O15466 376 aa17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 CRTAPO75718 401 aaPredicted RBP17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 RNF224P0DH78 156 aa17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 LMO1P25800 156 aa17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 WDFY1Q8IWB7 410 aa17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 OR51E1Q8TCB6 317 aa17.03■□□□□ 0.32
SNAPC3-206ENST00000490969 SLC37A2Q8TED4 501 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms