RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 TNFRSF1AP19438 455 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 SRMP19623 302 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 AGAP20933 346 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 CD40P25942 277 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 LOXP28300 417 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 APLNRP35414 380 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 MPV17P39210 176 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 SERPINB10P48595 397 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 UCP2P55851 309 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 CAV3P56539 151 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR10A3P58181 314 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 MXD1Q05195 221 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 GK2Q14410 553 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR8B8Q15620 311 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TBC1D28Q2M2D7 210 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 C3orf36Q3SXR2 165 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TIMM50Q3ZCQ8 353 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 SPATA46Q5T0L3 261 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TMEM244Q5VVB8 128 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TMEM42Q69YG0 159 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 KRT74Q7RTS7 529 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 LRRTM1Q86UE6 522 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 LYPD6Q86Y78 171 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR5AS1Q8N127 324 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 PARP16Q8N5Y8 322 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR51A2Q8NGJ7 313 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR13C3Q8NGS6 347 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 LINC01560Q8TB33 94 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 CA5BP1Q8WTZ4 195 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 DVL3Q92997 716 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TMEM106AQ96A25 262 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 APOBEC3DQ96AK3 386 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 FGGYQ96C11 551 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 MUCL1Q96DR8 90 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 ZC3HAV1LQ96H79 300 aaKnown RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 REEP6Q96HR9 211 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 FAM71F1Q96KD3 344 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 KCTD7Q96MP8 289 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 WWC2-AS2Q96NR7 200 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 DACH2Q96NX9 599 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 NKX3-1Q99801 234 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 DCUN1D5Q9BTE7 237 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 MED18Q9BUE0 208 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 WDR12Q9GZL7 423 aaKnown RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 SLIRPQ9GZT3 109 aaKnown RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 FGF23Q9GZV9 251 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 OR10A2Q9H208 303 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 ZNF275Q9NSD4 429 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TBCCD1Q9NVR7 557 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 TAS2R4Q9NYW5 299 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 RHBDD3Q9Y3P4 386 aa4.16□□□□□ -1.74
EPCAM-206ENST00000490733 RAI1Q7Z5J4 1906 aaPredicted RBP4.16□□□□□ -1.74
EPCAM-206ENST00000490733 AKAP6Q13023 2319 aa4.15□□□□□ -1.74
EPCAM-206ENST00000490733 TRAV1-2A0A0B4J238 106 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 A0A1B0GVI7 797 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 LOC390937A0A1W2PQ73 354 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 DEFB108AA8MXU0 73 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 ATP6V1G2-DDX39BF2Z307 99 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 XRCC2O43543 280 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 CLDN14O95500 239 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 IL1AP01583 271 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 RAF1P04049 648 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 PPP3CBP16298 524 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 IGFBP2P18065 325 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 DDOSTP39656 456 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 MTNR1BP49286 362 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 PPP1CBP62140 327 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 SORDQ00796 357 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 BSPH1Q075Z2 132 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 UBE2V2Q15819 145 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 ALKBH6Q3KRA9 238 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 HSD17B12Q53GQ0 312 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 ZNF544Q6NX49 715 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 MTFR2Q6P444 385 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 XKRXQ6PP77 449 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 PAMR1Q6UXH9 720 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 FBXW12Q6X9E4 464 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 USP43Q70EL4 1123 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 DOK3Q7L591 496 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 COMMD2Q86X83 199 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 ZNF808Q8N4W9 903 aaPredicted RBP4.15□□□□□ -1.75
EPCAM-206ENST00000490733 ACBD4Q8NC06 268 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 DNAAF1Q8NEP3 725 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 OR56B2PQ8NGI1 322 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 SLC25A40Q8TBP6 338 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 KLF14Q8TD94 323 aaPredicted RBP4.15□□□□□ -1.75
EPCAM-206ENST00000490733 SSC4DQ8WTU2 575 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 TSEN15Q8WW01 171 aaKnown RBP4.15□□□□□ -1.75
EPCAM-206ENST00000490733 PHYHIPQ92561 330 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 SLC25A46Q96AG3 418 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 MARS2Q96GW9 593 aaKnown RBP4.15□□□□□ -1.75
EPCAM-206ENST00000490733 OR2J1Q9GZK6 312 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 NXF2Q9GZY0 626 aaKnown RBP4.15□□□□□ -1.75
EPCAM-206ENST00000490733 TPK1Q9H3S4 243 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 RGCCQ9H4X1 137 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 CDH20Q9HBT6 801 aa4.15□□□□□ -1.75
EPCAM-206ENST00000490733 KCNJ16Q9NPI9 418 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms