RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 A6NIN4 97 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 SHISA9B4DS77 424 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 ERCC1P07992 297 aaPredicted RBP13.48□□□□□ -0.25
PCCB-218ENST00000490504 DANCRP0C864 163 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 PAX1P15863 534 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 RAB3AP20336 220 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 ASAH1Q13510 395 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 Q6ZSR3 168 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 CIARTQ8N365 385 aaPredicted RBP13.48□□□□□ -0.25
PCCB-218ENST00000490504 DTX3Q8N9I9 347 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 WDR31Q8NA23 367 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 C19orf18Q8NEA5 215 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 FBXW5Q969U6 566 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 FAM3DQ96BQ1 224 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 S100A16Q96FQ6 103 aaKnown RBP13.48□□□□□ -0.25
PCCB-218ENST00000490504 SOX7Q9BT81 388 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 TMEM138Q9NPI0 162 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 RHBDL2Q9NX52 303 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 V9GYS6 101 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
PCCB-218ENST00000490504 RAI1Q7Z5J4 1906 aaPredicted RBP13.48□□□□□ -0.25
PCCB-218ENST00000490504 ARID1AO14497 2285 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 LOC100289279A0A1B0GTE1 492 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 ABCD4O14678 606 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 DHRS3O75911 302 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 HTR2CP28335 458 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 ZNF83P51522 516 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 SNAI3Q3KNW1 292 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 C1orf100Q5SVJ3 147 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 TMEM53Q6P2H8 277 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 SSX8Q7RTT4 187 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 DPPA2Q7Z7J5 298 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 JAGN1Q8N5M9 183 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 OR51D1Q8NGF3 324 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 SLC25A28Q96A46 364 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 SORCS2Q96PQ0 1159 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 ABHD1Q96SE0 405 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 C1QTNF6Q9BXI9 259 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 CGGBP1Q9UFW8 167 aaPredicted RBP13.47□□□□□ -0.25
PCCB-218ENST00000490504 USF3Q68DE3 2245 aa13.47□□□□□ -0.25
PCCB-218ENST00000490504 SULT1B1O43704 296 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 MTRF1O75570 445 aaKnown RBP13.46□□□□□ -0.25
PCCB-218ENST00000490504 LCATP04180 440 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 COX5BP10606 129 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 THBS4P35443 961 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 ARR3P36575 388 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 POU3F4P49335 361 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 CAPZA1P52907 286 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 HGFACQ04756 655 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 GLYATL3Q5SZD4 288 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 LYPD6Q86Y78 171 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 OR1K1Q8NGR3 316 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 C10orf35Q96D05 121 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 HAVCR1Q96D42 359 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 UQCC2Q9BRT2 126 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 CISD1Q9NZ45 108 aaKnown RBP13.46□□□□□ -0.25
PCCB-218ENST00000490504 ZNF391Q9UJN7 358 aa13.46□□□□□ -0.25
PCCB-218ENST00000490504 H7C1Q1 480 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 OVOL3O00110 214 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 CTDSPLO15194 276 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 HLA-HP01893 362 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 INPP1P49441 399 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 MMP15P51511 669 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 ATP5J2P56134 94 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 C2orf76Q3KRA6 126 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 Q71RC1 249 aaPredicted RBP13.46□□□□□ -0.26
PCCB-218ENST00000490504 GDPD3Q7L5L3 318 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 BIVMQ86UB2 503 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 NANOS1Q8WY41 292 aaKnown RBP13.46□□□□□ -0.26
PCCB-218ENST00000490504 RFT1Q96AA3 541 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 SGK3Q96BR1 496 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 REEP6Q96HR9 211 aa13.46□□□□□ -0.26
PCCB-218ENST00000490504 METTL17Q9H7H0 456 aaPredicted RBP13.46□□□□□ -0.26
PCCB-218ENST00000490504 MRPS7Q9Y2R9 242 aaKnown RBP13.46□□□□□ -0.26
PCCB-218ENST00000490504 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
PCCB-218ENST00000490504 CADP27708 2225 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 DSCAMO60469 2012 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 DHRS7CA6NNS2 312 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 M0R1B8 84 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 TPPPO94811 219 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 CD79AP11912 226 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 CD40P25942 277 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 MNDAP41218 407 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 RANBP1P43487 201 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 TGFBR3Q03167 851 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 HACD4Q5VWC8 232 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 CDH26Q8IXH8 852 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
PCCB-218ENST00000490504 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
PCCB-218ENST00000490504 C1orf162Q8NEQ5 155 aaPredicted RBP13.45□□□□□ -0.26
PCCB-218ENST00000490504 OR52N4Q8NGI2 321 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 PP6455Q8WZ26 134 aa13.45□□□□□ -0.26
PCCB-218ENST00000490504 BCL2L2Q92843 193 aaPredicted RBP13.45□□□□□ -0.26
PCCB-218ENST00000490504 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms