RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 DEFB126Q9BYW3 111 aa11.61□□□□□ -0.55
TNXB-206ENST00000490077 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
TNXB-206ENST00000490077 UPB1Q9UBR1 384 aa11.61□□□□□ -0.55
TNXB-206ENST00000490077 MEGF11A6BM72 1044 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 K7ESF4 209 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ATG12O94817 140 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 NXPH3O95157 252 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 FARS2O95363 451 aaKnown RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 BPNT1O95861 308 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 UMODP07911 640 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 LPAR6P43657 344 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 RIPPLY1Q0D2K3 151 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZNF774Q6NX45 483 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 TMEM17Q86X19 198 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 HLA-CQ95604 372 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 TOMM40LQ969M1 308 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 METTL8Q9H825 291 aaKnown RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 A0A0J9YW62 118 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZIC3O60481 467 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 LRP3O75074 770 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 DKK1O94907 266 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 DUS4LO95620 317 aaKnown RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 DIRAS3O95661 229 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 DAOP14920 347 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 PTGFRP43088 359 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 FOXG1P55316 489 aaPredicted RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 HOXA4Q00056 320 aaPredicted RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZNF585AQ6P3V2 769 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ERGIC1Q969X5 290 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 MRPL24Q96A35 216 aaKnown RBP11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
TNXB-206ENST00000490077 ZNF705EA8MWA4 302 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 KRBOX1C9JBD0 128 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 ZNF587BE7ETH6 402 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 FXYD4P59646 89 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 THEM4Q5T1C6 240 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 SEMA6DQ8NFY4 1073 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 SLC25A43Q8WUT9 341 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 SPACA9Q96E40 222 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 SDHAF3Q9NRP4 125 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 RABL2AQ9UBK7 228 aaPredicted RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 RABL2BQ9UNT1 228 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 SRPK3Q9UPE1 567 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 ROS1P08922 2347 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 CACNA1HO95180 2353 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 ZNF726A6NNF4 738 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 B4GALT1P15291 398 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 CTRB1P17538 263 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 NAT1P18440 290 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 RPL35P42766 123 aaKnown RBP11.59□□□□□ -0.55
TNXB-206ENST00000490077 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 VASH2Q86V25 355 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 NABP1Q96AH0 204 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 SGK3Q96BR1 496 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 PECRQ9BY49 303 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 IL36RNQ9UBH0 155 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 FLVCR1Q9Y5Y0 555 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 SESN1Q9Y6P5 492 aa11.59□□□□□ -0.55
TNXB-206ENST00000490077 IGLV3-12A0A075B6K2 115 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 IGKV1-12A0A0C4DH73 117 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 EIF3GO75821 320 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNXB-206ENST00000490077 TSPAN9O75954 239 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 IGKV1D-12P01611 117 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 UBBP0CG47 229 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 SLC25A4P12235 298 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 RPS27AP62979 156 aaKnown RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 UBA52P62987 128 aaKnown RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 PHLDA2Q53GA4 152 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 DNM1P34Q6PK57 102 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 GTPBP8Q8N3Z3 284 aaPredicted RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 NKAIN3Q8N8D7 197 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 SSC4DQ8WTU2 575 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 NXT1Q9UKK6 140 aaKnown RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 COL5A1P20908 1838 aaPredicted RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 A0A0D9SG52 128 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 F8VVB4 439 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 F8VWA3 439 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 MUC1P15941 1255 aaPredicted RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 RAB6AP20340 208 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 WDR74Q6RFH5 385 aaPredicted RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 TSNAXQ99598 290 aaKnown RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 ZNF2Q9BSG1 426 aaPredicted RBP11.58□□□□□ -0.56
TNXB-206ENST00000490077 CHRNA10Q9GZZ6 450 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 SLC25A32Q9H2D1 315 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 ZC4H2Q9NQZ6 224 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 PLEK2Q9NYT0 353 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 RARRES3Q9UL19 164 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 PIEZO2Q9H5I5 2752 aa11.58□□□□□ -0.56
TNXB-206ENST00000490077 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
TNXB-206ENST00000490077 HSPB6O14558 160 aa11.57□□□□□ -0.56
TNXB-206ENST00000490077 ZFAND5O76080 213 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms