RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 NDUFA2O43678 99 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ENSAO43768 121 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 GMDSO60547 372 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 CLPXO76031 633 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 DIRAS1O95057 198 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 SFTPBP07988 381 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 NCK1P16333 377 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 HIST1H1CP16403 213 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 GSSP48637 474 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 RAG2P55895 527 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF92Q03936 586 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 PCK2Q16822 640 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC36A3Q495N2 470 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 MIDNQ504T8 468 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 GPR157Q5UAW9 335 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 PRAMEF6Q5VXH4 476 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ASPHD2Q6ICH7 369 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 C11orf87Q6NUJ2 197 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 DNM1P34Q6PK57 102 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 FIP1L1Q6UN15 594 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF620Q6ZNG0 422 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 PGAP1Q75T13 922 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 C11orf53Q8IXP5 236 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 C11orf44Q8N8P7 122 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 C19orf18Q8NEA5 215 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 OR4F5Q8NH21 305 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 OR4K13Q8NH42 304 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 LINC01006Q8NI28 216 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNRF4Q8WWF5 429 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 SLCO4A1Q96BD0 722 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 WDFY2Q96P53 400 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ERMAPQ96PL5 475 aaPredicted RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 PITX2Q99697 317 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 ATF6BQ99941 703 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC22A4Q9H015 551 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 GORASP2Q9H8Y8 452 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 MRPL15Q9P015 296 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 KAAG1Q9UBP8 84 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 FAM32AQ9Y421 112 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 TRAV38-1A0A0B4J264 116 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 IGHV1-69DA0A0B4J2H0 117 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 A0A0G2JK05 382 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 M0R135 149 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ECDO95905 644 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 IGHV1-69P01742 117 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 LCATP04180 440 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 PSKH1P11801 424 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 IRF2P14316 349 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 CA6P23280 308 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC6A6P31641 620 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 IER3P46695 156 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SMIM11AP58511 58 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 PSME3P61289 254 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 OR8G1Q15617 311 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 KCNJ8Q15842 424 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SNAI3Q3KNW1 292 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 FGD3Q5JSP0 725 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 PXDC1Q5TGL8 231 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 TEX36Q5VZQ5 186 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 RUSC1-AS1Q66K80 236 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 GLYATQ6IB77 296 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 MZT2AQ6P582 158 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 DRAM2Q6UX65 266 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 LINC00346Q8IVM7 164 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 GCSAMQ8N6F7 178 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SPERTQ8NA61 448 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ZSCAN4Q8NAM6 433 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 LY6G5BQ8NDX9 201 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 OR11L1Q8NGX0 322 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 OR2AJ1Q8NGZ0 328 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 OR52J3Q8NH60 311 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SPRYD4Q8WW59 207 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SSMEM1Q8WWF3 244 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 DYRK2Q92630 601 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF799Q96GE5 643 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 SNX22Q96L94 193 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 HIST1H2AAQ96QV6 131 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 KCTD14Q9BQ13 255 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 PCGF1Q9BSM1 259 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 MYLK2Q9H1R3 596 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 OR52D1Q9H346 318 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 C16orf95Q9H693 158 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 MARCH7Q9H992 704 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 FN3KRPQ9HA64 309 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 RPRD1BQ9NQG5 326 aaKnown RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 UFSP2Q9NUQ7 469 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ACOXLQ9NUZ1 547 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 ERVK-18Q9QC07 812 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 DNAJB11Q9UBS4 358 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 NKX1-2Q9UD57 310 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 KCNG2Q9UJ96 466 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 AURKCQ9UQB9 309 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 POLR1DQ9Y2S0 133 aa5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 NOP16Q9Y3C1 178 aaKnown RBP5.22□□□□□ -1.57
PRPF40A-210ENST00000489741 A0A0U1RQK1 487 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 OOEPA6NGQ2 149 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 BHLHE40O14503 412 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms