RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OR51E1Q8TCB6 317 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 FAM71F1Q96KD3 344 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 RAB3IPQ96QF0 476 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 CNTD2Q9H8S5 307 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 NOX4Q9NPH5 578 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 GPR84Q9NQS5 396 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 AP4S1Q9Y587 144 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 SELLP14151 372 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 TGM4P49221 684 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 AADACL4Q5VUY2 407 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 C1orf146Q5VVC0 180 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 NXNL2Q5VZ03 156 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 C12orf73Q69YU5 71 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 C16orf87Q6PH81 154 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 Q6YL49 198 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 KRT74Q7RTS7 529 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 AMIGO2Q86SJ2 522 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 ZDHHC13Q8IUH4 622 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 TMEM163Q8TC26 289 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 PPP1R14AQ96A00 147 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 GABARAPL1Q9H0R8 117 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 TNFRSF19Q9NS68 423 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 H2AFY2Q9P0M6 372 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-213ENST00000489045 ONECUT1Q9UBC0 465 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 NUFIP1Q9UHK0 495 aaKnown RBP18.98■□□□□ 0.63
COL9A3-213ENST00000489045 KPTNQ9Y664 436 aa18.98■□□□□ 0.63
COL9A3-213ENST00000489045 IGHV1-69DA0A0B4J2H0 117 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 NKX6-3A6NJ46 265 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 SLC22A31A6NKX4 558 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 IGLV3-1P01715 115 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 IGHV1-69P01742 117 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 TFF1P04155 84 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 ATP6V1B1P15313 513 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 CXCR4P61073 352 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 IL13RA1P78552 427 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 EFNB1P98172 346 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 CDONQ4KMG0 1287 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 LRRC10Q5BKY1 277 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 DMRTC1Q5HYR2 192 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 ATPAF1Q5TC12 328 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF322Q6U7Q0 402 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-213ENST00000489045 VMO1Q7Z5L0 202 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 THAP5Q7Z6K1 395 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 SLC35F2Q8IXU6 374 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 LY6G5BQ8NDX9 201 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 DNTTIP1Q9H147 329 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 UNKLQ9H9P5 680 aaKnown RBP18.97■□□□□ 0.63
COL9A3-213ENST00000489045 ADGRL4Q9HBW9 690 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 ACOXLQ9NUZ1 547 aa18.97■□□□□ 0.63
COL9A3-213ENST00000489045 MGAM2Q2M2H8 2515 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF732B4DXR9 585 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 GPR37O15354 613 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 SRSF10O75494 262 aaKnown RBP18.96■□□□□ 0.63
COL9A3-213ENST00000489045 RHBDL1O75783 438 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 ATP5HO75947 161 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 MELTFP08582 738 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 FAHP16930 419 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 GNG3P63215 75 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 CEACAM21Q3KPI0 293 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 SHISA2Q6UWI4 295 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 PDZD9Q8IXQ8 264 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 ANGPTL6Q8NI99 470 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 LRTOMTQ8WZ04 291 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 ITFG2Q969R8 447 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 DUS3LQ96G46 650 aaKnown RBP18.96■□□□□ 0.63
COL9A3-213ENST00000489045 GAFA1Q96PS6 74 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 IL4I1Q96RQ9 567 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 APOL4Q9BPW4 351 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 DCTN5Q9BTE1 182 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 OR51I2Q9H344 312 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 GTF2A1LQ9UNN4 478 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 PIGLQ9Y2B2 252 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 PKD1L1Q8TDX9 2849 aa18.96■□□□□ 0.63
COL9A3-213ENST00000489045 MAGEB4O15481 346 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-213ENST00000489045 TTRP02766 147 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 FCGR1AP12314 374 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 GLRA1P23415 457 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 OMGP23515 440 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 RIPPLY1Q0D2K3 151 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 PLCXD3Q63HM9 321 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 ZNF788Q6ZQV5 615 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 PLEKHG7Q6ZR37 379 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 MOB3CQ70IA8 216 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 H1FXQ92522 213 aaKnown RBP18.95■□□□□ 0.62
COL9A3-213ENST00000489045 TMIGD2Q96BF3 282 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 MNTQ99583 582 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 CIB1Q99828 191 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 NLKQ9UBE8 527 aa18.95■□□□□ 0.62
COL9A3-213ENST00000489045 A0A1B0GVI7 797 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 FAM181BA6NEQ2 426 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 ZNF670-ZNF695F2Z2N8 137 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 LOC110117498-PIK3R3F6TDL0 507 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 SPRY1O43609 319 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-213ENST00000489045 DHRS3O75911 302 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 DGUOKQ16854 277 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 ZBTB37Q5TC79 503 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 GID4Q8IVV7 300 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 KIR3DL3Q8N743 410 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 OR5A2Q8NGI9 324 aa18.94■□□□□ 0.62
COL9A3-213ENST00000489045 MED30Q96HR3 178 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms