RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 WDR25Q64LD2 544 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-218ENST00000489037 KRT74Q7RTS7 529 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 CATSPERDQ86XM0 798 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ACBD7Q8N6N7 88 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 RHOXF1Q8NHV9 184 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF671Q8TAW3 534 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-218ENST00000489037 RPL3LQ92901 407 aaKnown RBP11.92□□□□□ -0.5
BRCA1-218ENST00000489037 SLC22A13Q9Y226 551 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 RPL36Q9Y3U8 105 aaKnown RBP11.92□□□□□ -0.5
BRCA1-218ENST00000489037 IGHV3OR15-7A0A075B7D8 119 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 SRRM5B3KS81 715 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 DLGAP1O14490 977 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 FADS2O95864 444 aaKnown RBP11.91□□□□□ -0.5
BRCA1-218ENST00000489037 SERPINA3P01011 423 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 ADRA2CP18825 462 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 EPHA1P21709 976 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 ACTA2P62736 377 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 ACTG2P63267 376 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 LRRC36Q1X8D7 754 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 KLHL22Q53GT1 634 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 SLC36A1Q7Z2H8 476 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 BPIFB2Q8N4F0 458 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 PACRGLQ8N7B6 248 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 HPSE2Q8WWQ2 592 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 RORBQ92753 470 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 C12orf43Q96C57 262 aaKnown RBP11.91□□□□□ -0.5
BRCA1-218ENST00000489037 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
BRCA1-218ENST00000489037 SLC7A11Q9UPY5 501 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
BRCA1-218ENST00000489037 V9GYS6 101 aa11.91□□□□□ -0.5
BRCA1-218ENST00000489037 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 KIR2DS1A0A191URI9 304 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 A0A1B0GTI1 187 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
BRCA1-218ENST00000489037 HTR1AP08908 422 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 UBCP0CG48 685 aaKnown RBP11.9□□□□□ -0.5
BRCA1-218ENST00000489037 DBTP11182 482 aaKnown RBP11.9□□□□□ -0.5
BRCA1-218ENST00000489037 EGR1P18146 543 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 GABRB1P18505 474 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 GLRA1P23415 457 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 GMFBP60983 142 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 HOXA4Q00056 320 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF91Q05481 1191 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 CDONQ4KMG0 1287 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 TMEM244Q5VVB8 128 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 CYGBQ8WWM9 190 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 LGALS12Q96DT0 336 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 MDFIQ99750 246 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 INPP5EQ9NRR6 644 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 GPR173Q9NS66 373 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 ACOXLQ9NUZ1 547 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 AASSQ9UDR5 926 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
BRCA1-218ENST00000489037 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 J3QLW9 94 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 J3QRE1 110 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 AKR7A2O43488 359 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 NDUFB3O43676 98 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 GATBO75879 557 aaKnown RBP11.89□□□□□ -0.51
BRCA1-218ENST00000489037 ECDO95905 644 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-218ENST00000489037 LIPFP07098 398 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF19P17023 458 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 CCL1P22362 96 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 GABPB1Q06547 395 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-218ENST00000489037 PAX8Q06710 450 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 RAB40BQ12829 278 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 WDR38Q5JTN6 314 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 LPCAT4Q643R3 524 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF841Q6ZN19 808 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 DHRSXQ8N5I4 330 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
BRCA1-218ENST00000489037 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 TMIGD2Q96BF3 282 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 C10orf35Q96D05 121 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 JMJD8Q96S16 334 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 CCL13Q99616 98 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 ALG8Q9BVK2 526 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 SUCNR1Q9BXA5 334 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 VCXQ9H320 206 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 AMBNQ9NP70 447 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 CTSZQ9UBR2 303 aa11.89□□□□□ -0.51
BRCA1-218ENST00000489037 NUP50Q9UKX7 468 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms