RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FAM98BQ52LJ0 330 aaKnown RBP15.07■□□□□ 0
HDAC6-231ENST00000488905 FAM76BQ5HYJ3 339 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 C1orf122Q6ZSJ8 110 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 DHFR2Q86XF0 187 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.07■□□□□ 0
HDAC6-231ENST00000488905 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 MED30Q96HR3 178 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 LYZL4Q96KX0 146 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 OR51V1Q9H2C8 321 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 NLKQ9UBE8 527 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 ANKRD61A6NGH8 418 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 SELENOFO60613 162 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 NDUFB7P17568 137 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 MNAT1P51948 309 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 ACSM1Q08AH1 577 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 GK3PQ14409 553 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 ARHGAP24Q8N264 748 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 ZNF454Q8N9F8 522 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 OR8B12Q8NGG6 310 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 FAM110DQ8TAY7 271 aaPredicted RBP15.06■□□□□ 0
HDAC6-231ENST00000488905 PIGCQ92535 297 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 RNF170Q96K19 258 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 FEVQ99581 238 aa15.06■□□□□ 0
HDAC6-231ENST00000488905 DNAH3Q8TD57 4116 aa15.05■□□□□ 0
HDAC6-231ENST00000488905 ARRDC5A6NEK1 342 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 OR2AT4A6NND4 320 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 PRR23D1E9PI22 279 aaPredicted RBP15.05■□□□□ -0
HDAC6-231ENST00000488905 ACAA1P09110 424 aaPredicted RBP15.05■□□□□ -0
HDAC6-231ENST00000488905 PRR23D2P0DMB1 279 aaPredicted RBP15.05■□□□□ -0
HDAC6-231ENST00000488905 GLRA1P23415 457 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 GPM6AP51674 278 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 PLBD1Q6P4A8 553 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 C1QL4Q86Z23 238 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 PAPD5Q8NDF8 572 aaKnown RBP15.05■□□□□ -0
HDAC6-231ENST00000488905 BEND2Q8NDZ0 799 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 THEM6Q8WUY1 208 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 PPA2Q9H2U2 334 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 NIPAL2Q9H841 368 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 ELL3Q9HB65 397 aaPredicted RBP15.05■□□□□ -0
HDAC6-231ENST00000488905 KLHDC2Q9Y2U9 406 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 LRP12Q9Y561 859 aa15.05■□□□□ -0
HDAC6-231ENST00000488905 DSCAML1Q8TD84 2053 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 IGKV1D-17A0A075B6S4 117 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 H3BUX3 64 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 PRODHO43272 600 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 RHBDL1O75783 438 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 GABRA5P31644 462 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 BLMHQ13867 455 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 TRIM25Q14258 630 aaKnown RBP15.04■□□□□ -0
HDAC6-231ENST00000488905 PIGWQ7Z7B1 504 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 FAM81AQ8TBF8 368 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 GIPC3Q8TF64 312 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 DUS3LQ96G46 650 aaKnown RBP15.04■□□□□ -0
HDAC6-231ENST00000488905 TAS2R1Q9NYW7 299 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 FBLN5Q9UBX5 448 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 ZNF222Q9UK12 451 aa15.04■□□□□ -0
HDAC6-231ENST00000488905 TRBV23-1A0A0A0MS06 115 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 B2RBV5 119 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 CSF1P09603 554 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 RAP2AP10114 183 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 POU1F1P28069 291 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 GABRA2P47869 451 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 GNGT1P63211 74 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 GNG3P63215 75 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 MS4A2Q01362 244 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 SLC35E4Q6ICL7 350 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 HCP5Q6MZN7 132 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 ZNRF1Q8ND25 227 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 TMEM185AQ8NFB2 350 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 OR5D13Q8NGL4 314 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 C17orf50Q8WW18 174 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 HIST1H2AAQ96QV6 131 aa15.03■□□□□ -0
HDAC6-231ENST00000488905 ZNF732B4DXR9 585 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 ATP8B1O43520 1251 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 CST1P01037 141 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 PSG2P11465 335 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 CEP78Q5JTW2 689 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 KRT74Q7RTS7 529 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 FAM185AQ8N0U4 392 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 OR51G2Q8NGK0 314 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 OR51I2Q9H344 312 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 SF3B6Q9Y3B4 125 aaKnown RBP15.02■□□□□ -0
HDAC6-231ENST00000488905 MAB21L2Q9Y586 359 aa15.02■□□□□ -0
HDAC6-231ENST00000488905 A0A0U1RQV5 110 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 H0YAE9 185 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 ANGPTL7O43827 346 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 MAP2K3P46734 347 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 RPS7P62081 194 aaKnown RBP15.01□□□□□ -0.01
HDAC6-231ENST00000488905 GINS1Q14691 196 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 HERPUD1Q15011 391 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 CEACAM21Q3KPI0 293 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 SLC35D3Q5M8T2 416 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 Q6ZTK2 550 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 KRT77Q7Z794 578 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 CPOQ8IVL8 374 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 BBS1Q8NFJ9 593 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 CCDC124Q96CT7 223 aaKnown RBP15.01□□□□□ -0.01
HDAC6-231ENST00000488905 ASB9Q96DX5 294 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 SSX3Q99909 188 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 FAM206AQ9NX38 181 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms