RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 RPS5P46782 204 aaKnown RBP1.5□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF33AQ06730 810 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 FMODQ06828 376 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 CCL15Q16663 113 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 RPEL1Q2QD12 228 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 C6orf99Q4VX62 202 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 PDZD11Q5EBL8 140 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF678Q5SXM1 525 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 LDLRAD2Q5SZI1 272 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 TMEM236Q5W0B7 351 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 C8orf31Q8N9H6 132 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 OR4M2Q8NGB6 313 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 S100PBPQ96BU1 408 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 TEAD3Q99594 435 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 VSIRQ9H7M9 311 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 MRPS30Q9NP92 439 aaKnown RBP1.5□□□□□ -2.17
PTPN4-212ENST00000488896 AHSPQ9NZD4 102 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 RAB22AQ9UL26 194 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF257Q9Y2Q1 563 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 CAB39Q9Y376 341 aaPredicted RBP1.5□□□□□ -2.17
PTPN4-212ENST00000488896 SLC22A7Q9Y694 548 aa1.5□□□□□ -2.17
PTPN4-212ENST00000488896 CTNSO60931 367 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 RAB5AP20339 215 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 APLNRP35414 380 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 PPP1CAP62136 330 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 OR1Q1Q15612 314 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 OR2T5Q6IEZ7 315 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 PAGE2Q7Z2X7 111 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 RAB43Q86YS6 212 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 APRG1Q8IVJ8 170 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 OR2T29Q8NH02 315 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 FAM19A4Q96LR4 140 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 SCGB3A2Q96PL1 93 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 GPR21Q99679 349 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 AUNIPQ9H7T9 357 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 LYRM4Q9HD34 91 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 FBXO8Q9NRD0 319 aa1.49□□□□□ -2.17
PTPN4-212ENST00000488896 IGKV1-6A0A0C4DH72 117 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 SERTM2A0A1B0GWG4 89 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 LRRIQ4A6NIV6 560 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 ZBTB5O15062 677 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 SIVA1O15304 175 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 SYNGR2O43760 224 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 OR1G1P47890 313 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF181Q2M3W8 571 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 TMPPEQ6ZT21 453 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 FAM122BQ7Z309 247 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 UNC93AQ86WB7 457 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 CA5BP1Q8WTZ4 195 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 JSRP1Q96MG2 331 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-212ENST00000488896 EMC6Q9BV81 110 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 EXO5Q9H790 373 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 OR2S2Q9NQN1 319 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 CA10Q9NS85 328 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 MCUBQ9NWR8 336 aa1.48□□□□□ -2.17
PTPN4-212ENST00000488896 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 LOC102724200A0A096LPH7 203 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-212ENST00000488896 TRAV25A0A0B4J276 109 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 WRBO00258 174 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF73O43830 326 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-212ENST00000488896 CTAG2O75638 210 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 LCA5LO95447 670 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 IGKV1-39P01597 117 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 IGHMP01871 453 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 IGKV1D-39P04432 117 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 TACSTD2P09758 323 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 OR2B8PP59922 312 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 RAD51Q06609 339 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 TFDP2Q14188 446 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 MFSD14CQ5VZR4 134 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 RWDD4Q6NW29 188 aaKnown RBP1.47□□□□□ -2.17
PTPN4-212ENST00000488896 OR4D6Q8NGJ1 314 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 ZNF420Q8TAQ5 688 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-212ENST00000488896 ASZ1Q8WWH4 475 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 RXFP2Q8WXD0 754 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 APH1AQ96BI3 265 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 UBE2E2Q96LR5 201 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 AGMATQ9BSE5 352 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 SFXN3Q9BWM7 321 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 MS4A8Q9BY19 250 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 INIPQ9NRY2 104 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 TMEM131Q92545 1883 aa1.47□□□□□ -2.17
PTPN4-212ENST00000488896 PHLPP2Q6ZVD8 1323 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 IZUMO1RA6ND01 250 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 PSPHP1O15172 72 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 MPDU1O75352 247 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 KCNK2O95069 426 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 CATP04040 527 aaKnown RBP1.46□□□□□ -2.18
PTPN4-212ENST00000488896 PRB1P04280 392 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 CTSGP08311 255 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 FGF4P08620 206 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 ANXA8P13928 327 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 PRPS1L1P21108 318 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 GALP22466 123 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 CXCR1P25024 350 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 AP1S2P56377 157 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 OR12D2P58182 307 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 ATP6V0D1P61421 351 aa1.46□□□□□ -2.18
PTPN4-212ENST00000488896 BEX5Q5H9J7 111 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms