RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FAM201AQ5SY85 155 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 CLVS2Q5SYC1 327 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 RNLSQ5VYX0 342 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 DMKNQ6E0U4 476 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-210ENST00000488228 PRSS48Q7RTY5 328 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 EGFL6Q8IUX8 553 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 SPERTQ8NA61 448 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 C19orf18Q8NEA5 215 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 OR1M1Q8NGA1 313 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 HAVCR2Q8TDQ0 301 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 RPL3LQ92901 407 aaKnown RBP9.31□□□□□ -0.92
UBE4B-210ENST00000488228 PGLYRP3Q96LB9 341 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 FN3KRPQ9HA64 309 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 ABCB9Q9NP78 766 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 WIPI2Q9Y4P8 454 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 DOCK11Q5JSL3 2073 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 SONP18583 2426 aaKnown RBP9.3□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF732B4DXR9 585 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM178BH3BS89 294 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 OGG1O15527 345 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 EGR1P18146 543 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 IL2RGP31785 369 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 CD80P33681 288 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 SOX2P48431 317 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 TAS2R43P59537 309 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 MZT1Q08AG7 82 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 ZMYND11Q15326 602 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 TBCEQ15813 527 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-210ENST00000488228 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 KRT74Q7RTS7 529 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 BOLLQ8N9W6 283 aaKnown RBP9.3□□□□□ -0.92
UBE4B-210ENST00000488228 CCDC54Q8NEL0 328 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 OR13C9Q8NGT0 318 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 OR11L1Q8NGX0 322 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 Q8TCH9 128 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 GHSRQ92847 366 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 FGGYQ96C11 551 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 TIMD4Q96H15 378 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 RNF170Q96K19 258 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 METTL17Q9H7H0 456 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-210ENST00000488228 DHDHQ9UQ10 334 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
UBE4B-210ENST00000488228 OR5B21A6NL26 309 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM210A6NLX4 147 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 LRRC30A6NM36 301 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 GATBO75879 557 aaKnown RBP9.29□□□□□ -0.92
UBE4B-210ENST00000488228 IGHV2-70P01814 119 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 HSMCR30P0CW71 290 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 CD99P14209 185 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 IRF2P14316 349 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF12P17014 697 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 CELP19835 753 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 USF1P22415 310 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM33P57088 247 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 GMFBP60983 142 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 BTG1P62324 171 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 GNG3P63215 75 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 SPHARQ15513 63 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 UBE2V2Q15819 145 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 ASPHD2Q6ICH7 369 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 HAGHLQ6PII5 290 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-210ENST00000488228 WDR82Q6UXN9 313 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 C11orf53Q8IXP5 236 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 SCCPDHQ8NBX0 429 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 CLDND2Q8NHS1 167 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 GPR148Q8TDV2 347 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 HPS1Q92902 700 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 ITFG2Q969R8 447 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 ORAI1Q96D31 301 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 HIST1H2AAQ96QV6 131 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 SMR3AQ99954 134 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 TLNRD1Q9H1K6 362 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF281Q9Y2X9 895 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 NPTNQ9Y639 398 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 WNK2Q9Y3S1 2297 aa9.29□□□□□ -0.92
UBE4B-210ENST00000488228 IGKV1-27A0A075B6S5 117 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 IGKV1-9A0A0C4DH69 117 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 FAM230AA0A1W2PPH8 454 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 PQLC2LA1A4F0 135 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 CDIPTO14735 213 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 RHBDL1O75783 438 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 PLATP00750 562 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 INHBBP09529 407 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 OCM2P0CE71 109 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 CHN2P52757 468 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 RPS11P62280 158 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBE4B-210ENST00000488228 BDH1Q02338 343 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-210ENST00000488228 ACSM1Q08AH1 577 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 CNN3Q15417 329 aaKnown RBP9.28□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF181Q2M3W8 571 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 LIPKQ5VXJ0 399 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 BATF2Q8N1L9 274 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 GCSAMQ8N6F7 178 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms