RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TAF10Q12962 218 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 DUSP8Q13202 625 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 CEBPEQ15744 281 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 LINC01590Q5TEZ4 76 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 AADACL3Q5VUY0 350 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 LEMD1Q68G75 181 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TANGO2Q6ICL3 276 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM220Q6QAJ8 160 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SMIM15Q7Z3B0 74 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TGIF2LYQ8IUE0 185 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 FAM219AQ8IW50 185 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 FOXRED2Q8IWF2 684 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 COX18Q8N8Q8 333 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 EXD3Q8N9H8 876 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF740Q8NDX6 193 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 MFSD8Q8NHS3 518 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 KCNE4Q8WWG9 221 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM106AQ96A25 262 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZG16BQ96DA0 208 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 ALG14Q96F25 216 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR10C1Q96KK4 312 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 Q96M85 177 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PYGO2Q9BRQ0 406 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR11A1Q9GZK7 315 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SRD5A3Q9H8P0 318 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PELI2Q9HAT8 420 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 DNAJC4Q9NNZ3 241 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 C5AR2Q9P296 337 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 MRM2Q9UI43 246 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 GTF2A1LQ9UNN4 478 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 MED31Q9Y3C7 131 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 YIPF1Q9Y548 306 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 A0A0G2JLL6 359 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 CXorf51AA0A1B0GTR3 108 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PRSS47A8MTI9 375 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF705GA8MUZ8 300 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 CLDN34H7C241 214 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 GEMIN2O14893 280 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ARPC3O15145 178 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NDUFS4O43181 175 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PLRG1O43660 514 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 LDB3O75112 727 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 DEDDO75618 318 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SNAI1O95863 264 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 TOMM40O96008 361 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 CYB5R3P00387 301 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OPN1MWP04001 364 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR4Q2P0C623 313 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF888P0CJ79 500 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PGA3P0DJD8 388 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OPN1MW2P0DN77 364 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OPN1MW3P0DN78 364 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 IRF1P10914 325 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 HIST1H1CP16403 213 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PI3P19957 117 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SERPINA4P29622 427 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 HOXC8P31273 242 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 TLX1P31314 330 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 FCGR2CP31995 323 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 APOBEC1P41238 236 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SOX2P48431 317 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 GATMP50440 423 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NCBP2P52298 156 aaKnown RBP eCLIP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SUPT4H1P63272 117 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 REEP5Q00765 189 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SGCGQ13326 291 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 EIF2B1Q14232 305 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PCOLCEQ15113 449 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 TBR1Q16650 682 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF260Q3ZCT1 412 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 DUSP28Q4G0W2 176 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NKAIN1Q4KMZ8 207 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF506Q5JVG8 444 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 VAX1Q5SQQ9 334 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 PRAMEF14Q5SWL7 426 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 COL5A1-AS1Q5SY13 56 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 DEGS2Q6QHC5 323 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 CLEC18BQ6UXF7 455 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SSX7Q7RTT5 188 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SLC16A9Q7RTY1 509 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NUFIP2Q7Z417 695 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SZRD1Q7Z422 152 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 APOBEC3FQ8IUX4 373 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 GCNT2Q8N0V5 402 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF615Q8N8J6 731 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NPEPL1Q8NDH3 523 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 SEMA6DQ8NFY4 1073 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR52E2Q8NGJ4 325 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR9A1PQ8NGU1 263 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR4X1Q8NH49 305 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 ASB5Q8WWX0 329 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM18Q96B42 140 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 C4orf45Q96LM5 186 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 LMF1Q96S06 567 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 GPX7Q96SL4 187 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
CDC42BPA-213ENST00000488131 NUDT9Q9BW91 350 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms