RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SCN3BQ9NY72 215 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 MPC1Q9Y5U8 109 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 IGKV1-27A0A075B6S5 117 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 hCG_1807616A0A1W2PRN6 198 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 MTRF1O75570 445 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 ISG15P05161 165 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 CCDC159P0C7I6 412 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 ATP6V1B1P15313 513 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 SEC61A1P61619 476 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 CLVS2Q5SYC1 327 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 RPL22L1Q6P5R6 122 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 LYPD2Q6UXB3 125 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 WDR82Q6UXN9 313 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 ANGPTL5Q86XS5 388 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 GCSAMQ8N6F7 178 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 SCCPDHQ8NBX0 429 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 OR5AK2Q8NH90 309 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 Q8TCH9 128 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 CCDC90BQ9GZT6 254 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 FN3KRPQ9HA64 309 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 TMEM165Q9HC07 324 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 TPRKBQ9Y3C4 175 aa14.39□□□□□ -0.11
SHROOM1-205ENST00000488072 ZANQ9Y493 2812 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 FAM230AA0A1W2PPH8 454 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 ANXA2P2A6NMY6 339 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 MYL12BO14950 172 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 RGS10O43665 173 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 SYNGR1O43759 233 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 INMTO95050 263 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 WNT4P56705 351 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 INSL4Q14641 139 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 CEACAM21Q3KPI0 293 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 DMKNQ6E0U4 476 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 CELF2-AS1Q8N7Q2 184 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 SPERTQ8NA61 448 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 OR13C3Q8NGS6 347 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 LRRC29Q8WV35 223 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 GHSRQ92847 366 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 MYDGFQ969H8 173 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 PGLYRP3Q96LB9 341 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 SPACA5Q96QH8 159 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 RTL8AQ9BWD3 113 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 CDCA4Q9BXL8 241 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 WDR13Q9H1Z4 485 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 OR51I2Q9H344 312 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 C14orf119Q9NWQ9 140 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 RNF7Q9UBF6 113 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 HHLA2Q9UM44 414 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 TANC2Q9HCD6 1990 aa14.38□□□□□ -0.11
SHROOM1-205ENST00000488072 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 A0A1B0GW55 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 A0A1W2PPK0 400 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 PQLC2LA1A4F0 135 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 AKR7A2O43488 359 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L2P0CJ85 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L3P0CJ86 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L4P0CJ87 422 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L5P0CJ88 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L6P0CJ89 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L7P0CJ90 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 ZNF16P17020 682 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 RPS11P62280 158 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 BTG1P62324 171 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 ZBTB37Q5TC79 503 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 HAGHLQ6PII5 290 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 CRIP3Q6Q6R5 217 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4L9Q6RFH8 374 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 CLEC9AQ6UXN8 241 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 CALHM1Q8IU99 346 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 FGFRL1Q8N441 504 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 OR13C9Q8NGT0 318 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 RAB1CQ92928 201 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 MSI2Q96DH6 328 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 TLNRD1Q9H1K6 362 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 PLEKHA1Q9HB21 404 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 DUX4Q9UBX2 424 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 ERGIC3Q9Y282 383 aa14.37□□□□□ -0.11
SHROOM1-205ENST00000488072 TMEM212A6NML5 194 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 PLATP00750 562 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 LHBP01229 141 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 EEF1B2P24534 225 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 CHN2P52757 468 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 RBM48Q5RL73 367 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 LRRC28Q86X40 367 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 OR5A2Q8NGI9 324 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 OR51A2Q8NGJ7 313 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 OR11L1Q8NGX0 322 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 RFT1Q96AA3 541 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 SMIM19Q96E16 107 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 GAL3ST1Q99999 423 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 TMEM246Q9BRR3 403 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 CHST5Q9GZS9 411 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 ZNF665Q9H7R5 613 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 TRIM36Q9NQ86 728 aa14.36□□□□□ -0.11
SHROOM1-205ENST00000488072 SNTG1Q9NSN8 517 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms