RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OPRM1P35372 400 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 FUT6P51993 359 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 MTCP1P56278 107 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PLCXD3Q63HM9 321 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 FBXW12Q6X9E4 464 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ASCL4Q6XD76 172 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 CADM3Q8N126 398 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PIGCQ92535 297 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 BORCS8Q96FH0 119 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 GAL3ST1Q99999 423 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 C7orf50Q9BRJ6 194 aaKnown RBP8.12□□□□□ -1.11
SF3B1-211ENST00000487698 NICN1Q9BSH3 213 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM59Q9BXS4 323 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 CDH20Q9HBT6 801 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 MTFP1Q9UDX5 166 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 Q9UFV3 132 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 GPR160Q9UJ42 338 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 A0A1W2PP11 408 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 FAM230AA0A1W2PPH8 454 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 CD300LBA8K4G0 201 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF850A8MQ14 1090 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 MPIG6BO95866 241 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF35P13682 527 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 RPS27AP62979 156 aaKnown RBP8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PRDX4Q13162 271 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF260Q3ZCT1 412 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PLA1AQ53H76 456 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 MOB3CQ70IA8 216 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 FAM89BQ8N5H3 189 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ENKURQ8TC29 256 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 GPX8Q8TED1 209 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 HPSE2Q8WWQ2 592 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 AQP3Q92482 292 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PAPOLGQ9BWT3 736 aaKnown RBP8.12□□□□□ -1.11
SF3B1-211ENST00000487698 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-211ENST00000487698 CST11Q9H112 138 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PIGMQ9H3S5 423 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PQLC2LA1A4F0 135 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 FOXI3A8MTJ6 420 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 A8MXE2 369 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SULT1C2O00338 296 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 ECDO95905 644 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CECR9P0C854 216 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 IL32P24001 234 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 PRSS3P35030 304 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 PLA2G5P39877 138 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 PPP1CBP62140 327 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SSBP1Q04837 148 aaKnown RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 RBPJQ06330 500 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SLC22A6Q4U2R8 563 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MRGPRGQ86SM5 289 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 GLCCI1Q86VQ1 547 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 FTMTQ8N4E7 242 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 S100PBPQ96BU1 408 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CMBLQ96DG6 245 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 FAM122AQ96E09 287 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SEH1LQ96EE3 360 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 C1QTNF6Q9BXI9 259 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MMP28Q9H239 520 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 OR51B6Q9H340 312 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 BANF2Q9H503 90 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 EIF3KQ9UBQ5 218 aaKnown RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF629Q9UEG4 869 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SLC7A11Q9UPY5 501 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 IGHV1-18A0A0C4DH31 117 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 FAM240BA0A1B0GVZ2 78 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MED19A0JLT2 244 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 LILRA1O75019 489 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 LPLP06858 475 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CHRM2P08172 466 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MELTFP08582 738 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MGMTP16455 207 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 BMP5P22003 454 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 VEGFCP49767 419 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 ATP1B3P54709 279 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 UCP2P55851 309 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 AP3S2P59780 193 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 FAM189A2Q15884 450 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CEACAM21Q3KPI0 293 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 SPATA46Q5T0L3 261 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 C1QTNF12Q5T7M4 302 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 OLFML2AQ68BL7 652 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 NCCRP1Q6ZVX7 275 aaPredicted RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 ZDHHC23Q8IYP9 409 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 PXT1Q8NFP0 134 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 DEDD2Q8WXF8 326 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 UPRTQ96BW1 309 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 RNF170Q96K19 258 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 TM2D1Q9BX74 207 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 MOV10Q9HCE1 1003 aaKnown RBP8.11□□□□□ -1.11
SF3B1-211ENST00000487698 IL36GQ9NZH8 169 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 JKAMPQ9P055 326 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 NLKQ9UBE8 527 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 ELF5Q9UKW6 265 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms