RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 ZNF302Q9NR11 478 aa3.5□□□□□ -1.85
CUL3-211ENST00000487558 STMN3Q9NZ72 180 aa3.5□□□□□ -1.85
CUL3-211ENST00000487558 VAPAQ9P0L0 249 aa3.5□□□□□ -1.85
CUL3-211ENST00000487558 VAX2Q9UIW0 290 aa3.5□□□□□ -1.85
CUL3-211ENST00000487558 TRAV8-7A0A075B6U6 113 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 ZMPSTE24O75844 475 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 HLA-DQB1P01920 261 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 ZNF32P17041 273 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 EIF4EBP1Q13541 118 aaPredicted RBP3.49□□□□□ -1.85
CUL3-211ENST00000487558 ABCA11PQ4W5N1 156 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 HHATQ5VTY9 493 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 NECAP1Q8NC96 275 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 ZNF461Q8TAF7 563 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 SFXN5Q8TD22 340 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 ALS2CR12Q96Q35 445 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 CDX2Q99626 313 aaPredicted RBP3.49□□□□□ -1.85
CUL3-211ENST00000487558 RNF5Q99942 180 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 PRRG3Q9BZD7 231 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 CSNK1G1Q9HCP0 422 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 TMEM100Q9NV29 134 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 RAB23Q9ULC3 237 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 SLC7A11Q9UPY5 501 aa3.49□□□□□ -1.85
CUL3-211ENST00000487558 RBMX2Q9Y388 322 aaKnown RBP3.49□□□□□ -1.85
CUL3-211ENST00000487558 BRCA1P38398 1863 aaKnown RBP3.49□□□□□ -1.85
CUL3-211ENST00000487558 NPHP4O75161 1426 aaPredicted RBP3.48□□□□□ -1.85
CUL3-211ENST00000487558 TRAV8-6A0A0B4J262 113 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 TVP23AA6NH52 213 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 YKT6O15498 198 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 CCNKO75909 580 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 IGLV3-25P01717 112 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 CASQ1P31415 396 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 GALR1P47211 349 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 DNASE1L1P49184 302 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 RGS6P49758 472 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 C18orf21Q32NC0 220 aaPredicted RBP3.48□□□□□ -1.85
CUL3-211ENST00000487558 KDM4DQ6B0I6 523 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
CUL3-211ENST00000487558 OR4M2Q8NGB6 313 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 LGALS14Q8TCE9 139 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 OR10C1Q96KK4 312 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 CHCHD7Q9BUK0 85 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 NUDT9Q9BW91 350 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 WDR55Q9H6Y2 383 aaPredicted RBP3.48□□□□□ -1.85
CUL3-211ENST00000487558 SIRT7Q9NRC8 400 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 NECAP2Q9NVZ3 263 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 LRRC42Q9Y546 428 aa3.48□□□□□ -1.85
CUL3-211ENST00000487558 IGHV3-49A0A0A0MS15 119 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 FAM240AA0A1B0GVK7 77 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 CENPBD1B2RD01 187 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 J3QT63 122 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 CCDC22O60826 627 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 SC5DO75845 299 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 SCO1O75880 301 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 GPR4P46093 362 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 PRLHRP49683 370 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 PSMB2P49721 201 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 DYNC1I2Q13409 638 aaKnown RBP3.47□□□□□ -1.85
CUL3-211ENST00000487558 MAD2L1BPQ15013 274 aaPredicted RBP3.47□□□□□ -1.85
CUL3-211ENST00000487558 COX19Q49B96 90 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 APOBEC3HQ6NTF7 200 aaKnown RBP3.47□□□□□ -1.85
CUL3-211ENST00000487558 EPGNQ6UW88 154 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 SHISA6Q6ZSJ9 500 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 CYB561A3Q8NBI2 242 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 OR5T1Q8NG75 326 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 OR13G1Q8NGZ3 307 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 C17orf50Q8WW18 174 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 COPS4Q9BT78 406 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 COA1Q9GZY4 146 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 SDHAF2Q9NX18 166 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 C21orf62Q9NYP8 219 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 OPN4Q9UHM6 478 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 ZNF229Q9UJW7 825 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 TFR2Q9UP52 801 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 FARSAQ9Y285 508 aaKnown RBP3.47□□□□□ -1.85
CUL3-211ENST00000487558 AP3M1Q9Y2T2 418 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 ACOT9Q9Y305 439 aa3.47□□□□□ -1.85
CUL3-211ENST00000487558 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.85
CUL3-211ENST00000487558 C7orf66A4D0T2 115 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 TMEM150BA6NC51 233 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 ERICH4A6NGS2 130 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 ZNF593O00488 134 aaPredicted RBP3.46□□□□□ -1.86
CUL3-211ENST00000487558 NEMFO60524 1076 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 LIPCP11150 499 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CCL2P13500 99 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CD9P21926 228 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 PSMB5P28074 263 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 PRSS3P35030 304 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 DSTNP60981 165 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 PITPNAQ00169 270 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CDC20Q12834 499 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CDNFQ49AH0 187 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 H1FOOQ8IZA3 346 aaPredicted RBP3.46□□□□□ -1.86
CUL3-211ENST00000487558 CIB1Q99828 191 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CTRCQ99895 268 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 C20orf144Q9BQM9 153 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 PPIL1Q9Y3C6 166 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 CBY1Q9Y3M2 126 aa3.46□□□□□ -1.86
CUL3-211ENST00000487558 PLA2R1Q13018 1463 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms