RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLVS1Q8IUQ0 354 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-229ENST00000486665 ZDHHC23Q8IYP9 409 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR2Z1Q8NG97 314 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR1M1Q8NGA1 313 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR10AD1Q8NGE0 317 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR51A2Q8NGJ7 313 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR5D14Q8NGL3 314 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR13C9Q8NGT0 318 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 HPSE2Q8WWQ2 592 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 PP6455Q8WZ26 134 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR5P3Q8WZ94 311 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 CHST5Q9GZS9 411 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 TPK1Q9H3S4 243 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 CYSLTR2Q9NS75 346 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 FAIMQ9NVQ4 179 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 CEPT1Q9Y6K0 416 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-229ENST00000486665 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 IGHV3-64DA0A0J9YX35 117 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 M0R233 179 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 ADRA2CP18825 462 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 SRMP19623 302 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 MAPK3P27361 379 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-229ENST00000486665 CALRP27797 417 aaKnown RBP10.84□□□□□ -0.67
HDAC6-229ENST00000486665 MAB21L1Q13394 359 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 CEACAM21Q3KPI0 293 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 WDR86Q86TI4 376 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 PHYHIPQ92561 330 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 ITPKCQ96DU7 683 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 ELMOD3Q96FG2 381 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 RNF170Q96K19 258 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 ADAT1Q9BUB4 502 aaKnown RBP10.84□□□□□ -0.67
HDAC6-229ENST00000486665 CACNG6Q9BXT2 260 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 DYNLRB1Q9NP97 96 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 FOXJ3Q9UPW0 622 aa10.84□□□□□ -0.67
HDAC6-229ENST00000486665 TLN2Q9Y4G6 2542 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 LOC100289279A0A1B0GTE1 492 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 FAM230AA0A1W2PPH8 454 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 DPPA5A6NC42 116 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 ZNF732B4DXR9 585 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 SULT1B1O43704 296 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 ALX3O95076 343 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 MAS1P04201 325 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 FSTP19883 344 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 RAB3AP20336 220 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 RBMXP38159 391 aaKnown RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 CDKN1AP38936 164 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 PPOXP50336 477 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 NCS1P62166 190 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 HNRNPA0Q13151 305 aaKnown RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 CTF1Q16619 201 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 CRIP3Q6Q6R5 217 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 GDPGP1Q6ZNW5 385 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 OR52N4Q8NGI2 321 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 OR8S1Q8NH09 359 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 TRMT10AQ8TBZ6 339 aaKnown RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 THRSPQ92748 146 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 SPACA5Q96QH8 159 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 HIST1H2AAQ96QV6 131 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 GFI1Q99684 422 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 NKX3-1Q99801 234 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 VRK1Q99986 396 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 MICU1Q9BPX6 476 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 CGGBP1Q9UFW8 167 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-229ENST00000486665 ZDHHC8Q9ULC8 765 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 GSTK1Q9Y2Q3 226 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
HDAC6-229ENST00000486665 IGKV1-27A0A075B6S5 117 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 PQLC2LA1A4F0 135 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 ANXA2P2A6NMY6 339 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 OVOL3O00110 214 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 ARL6IP5O75915 188 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 GABARAPO95166 117 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 GRPP07492 148 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 ADH4P08319 380 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 CLEC2LP0C7M8 214 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 AZGP1P25311 298 aaKnown RBP10.82□□□□□ -0.68
HDAC6-229ENST00000486665 BDKRB2P30411 391 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 CD200P41217 278 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 GPM6AP51674 278 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 FUT6P51993 359 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 VBP1P61758 197 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 CCL8P80075 99 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 TNFAIP6P98066 277 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-229ENST00000486665 TIMM50Q3ZCQ8 353 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 PRAMEF6Q5VXH4 476 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 SPERTQ8NA61 448 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 DNAAF1Q8NEP3 725 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 ITLN1Q8WWA0 313 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 MEGF10Q96KG7 1140 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 KCTD7Q96MP8 289 aa10.82□□□□□ -0.68
HDAC6-229ENST00000486665 RBM38Q9H0Z9 239 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms