RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 OR8B3Q8NGG8 313 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 CNIH3Q8TBE1 160 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 RNF166Q96A37 237 aaPredicted RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 C4orf36Q96KX1 117 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 OR8B2Q96RD0 313 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 METTL17Q9H7H0 456 aaPredicted RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 PLEKHA1Q9HB21 404 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 POLR3KQ9Y2Y1 108 aaPredicted RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 ANK3Q12955 4377 aaKnown RBP15.21■□□□□ 0.03
COL1A1-207ENST00000486572 TRAV38-1A0A0B4J264 116 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 PPIAL4CA0A0B4J2A2 164 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 OR5B21A6NL26 309 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 KIAA1324LA8MWY0 1029 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-207ENST00000486572 H0YAE9 185 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 J3QLI3 93 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 J3QLW9 94 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 SYT7O43581 403 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 NRASP01111 189 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 ZNF19P17023 458 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 EGR1P18146 543 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 CFHR2P36980 270 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 CAPGP40121 348 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 KIR3DL2P43630 455 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 GNG3P63215 75 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 CLVS2Q5SYC1 327 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 TMEM42Q69YG0 159 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 FDX2Q6P4F2 183 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 MOB3CQ70IA8 216 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 LHFPL3Q86UP9 236 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 SYS1Q8N2H4 156 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 CCDC54Q8NEL0 328 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 OR5A2Q8NGI9 324 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 OR52I1Q8NGK6 324 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 OR2G2Q8NGZ5 317 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
COL1A1-207ENST00000486572 SSBP3Q9BWW4 388 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-207ENST00000486572 ERVK13-1Q9NX77 482 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 OR5V1Q9UGF6 321 aa15.21■□□□□ 0.03
COL1A1-207ENST00000486572 LOC107986453A0A1B0GWG9 222 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF732B4DXR9 585 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 PHF1O43189 567 aaPredicted RBP15.2■□□□□ 0.02
COL1A1-207ENST00000486572 IFNA2P01563 188 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 HTR1AP08908 422 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 SRP14P37108 136 aaKnown RBP15.2■□□□□ 0.02
COL1A1-207ENST00000486572 PITPNBP48739 271 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 GNB2P62879 340 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 DMRTC1Q5HYR2 192 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 TEX36Q5VZQ5 186 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 LYPD2Q6UXB3 125 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 FAM90A1Q86YD7 464 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 EGFL6Q8IUX8 553 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 OR10Z1Q8NGY1 313 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 PELI1Q96FA3 418 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 HSPE1-MOB4S4R3N1 261 aa15.2■□□□□ 0.02
COL1A1-207ENST00000486572 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 SRRM5B3KS81 715 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 H3BSH0 61 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 NDUFA2O43678 99 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 MUC1P15941 1255 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF12P17014 697 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 CCR9P51686 369 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 NANOS3P60323 173 aaKnown RBP15.19■□□□□ 0.02
COL1A1-207ENST00000486572 C8orf59Q8N0T1 100 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-207ENST00000486572 TEX29Q8N6K0 151 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF649Q9BS31 505 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 JAM3Q9BX67 310 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 TMPRSS13Q9BYE2 586 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 OR51I2Q9H344 312 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 FGF20Q9NP95 211 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-207ENST00000486572 GPR173Q9NS66 373 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 FRRS1LQ9P0K9 344 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 CLN8Q9UBY8 286 aa15.19■□□□□ 0.02
COL1A1-207ENST00000486572 IGHV3OR15-7A0A075B7D8 119 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 ANKRD61A6NGH8 418 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 A6NIN4 97 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-207ENST00000486572 GYPAP02724 150 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 ISG15P05161 165 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 GNAO1P09471 354 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 MRPL28Q13084 256 aaKnown RBP15.18■□□□□ 0.02
COL1A1-207ENST00000486572 MICBQ29980 383 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 TMEM244Q5VVB8 128 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 ISG20L2Q9H9L3 353 aaKnown RBP15.18■□□□□ 0.02
COL1A1-207ENST00000486572 MMP26Q9NRE1 261 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 CTSZQ9UBR2 303 aa15.18■□□□□ 0.02
COL1A1-207ENST00000486572 TRAPPC2LH3BP13 241 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 TNFRSF13BO14836 293 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-207ENST00000486572 ADAM20O43506 726 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 LIMS3P0CW19 117 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 LIMS4P0CW20 117 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 DCKP27707 260 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 NPY4RP50391 375 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 WDR25Q64LD2 544 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-207ENST00000486572 HAGHLQ6PII5 290 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF841Q6ZN19 808 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 RDH10Q8IZV5 341 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 NRG4Q8WWG1 115 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 C12orf43Q96C57 262 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms