RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 HOXD4P09016 255 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-208ENST00000486533 H2BFMP0C1H6 154 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 OR4E1P0C645 316 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 FKBP2P26885 142 aaKnown RBP7.92□□□□□ -1.14
COL12A1-208ENST00000486533 HSD11B1P28845 292 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 BDKRB2P30411 391 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 STARP49675 285 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 KRTAP10-9P60411 292 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 MYBPHQ13203 477 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 ARL6IP1Q15041 203 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 OR7E24Q6IFN5 339 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 RGS7BPQ6MZT1 257 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-208ENST00000486533 MUC20Q8N307 709 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-208ENST00000486533 STPG2Q8N412 459 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 BPIFB2Q8N4F0 458 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 SLC22A24Q8N4F4 322 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 JAGN1Q8N5M9 183 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 ACBD4Q8NC06 268 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 STEAP2Q8NFT2 490 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 OR5M8Q8NGP6 311 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 MFSD8Q8NHS3 518 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 COQ8AQ8NI60 647 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 PHB2Q99623 299 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 PDCD10Q9BUL8 212 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 ABHD6Q9BV23 337 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 POFUT1Q9H488 388 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 IFT46Q9NQC8 304 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 KLRF1Q9NZS2 232 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 LRP12Q9Y561 859 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 MPDZO75970 2070 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 MED12Q93074 2177 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 LOC107986453A0A1B0GWG9 222 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 DCTN6O00399 190 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 CFDP00746 253 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 IFNA6P05013 189 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 HPNP05981 417 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 CHRM2P08172 466 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 NMBP08949 121 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 HLA-GP17693 338 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 IGFBP2P18065 325 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 PRKACBP22694 351 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 CBX5P45973 191 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 C17orf67Q0P5P2 114 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 WIPI1Q5MNZ9 446 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 GLYATL3Q5SZD4 288 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 UQCC3Q6UW78 93 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 H1FNTQ75WM6 255 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 OR2W3Q7Z3T1 314 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 MARCH3Q86UD3 253 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF546Q86UE3 836 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM200AQ86VY9 491 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 DMRTC2Q8IXT2 367 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 ADPRHL1Q8NDY3 354 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 CCDC54Q8NEL0 328 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 PXT1Q8NFP0 134 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 OR5M1Q8NGP8 315 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 LHFPL5Q8TAF8 219 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 THAP6Q8TBB0 222 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 GPR119Q8TDV5 335 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 SLC25A28Q96A46 364 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 SEH1LQ96EE3 360 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM41AQ96HV5 264 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 PTDSS2Q9BVG9 487 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 SERINC1Q9NRX5 453 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 TAS2R4Q9NYW5 299 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 FBLN5Q9UBX5 448 aa7.91□□□□□ -1.14
COL12A1-208ENST00000486533 NOP16Q9Y3C1 178 aaKnown RBP7.91□□□□□ -1.14
COL12A1-208ENST00000486533 HIVEP1P15822 2718 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 A8MXK9 166 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 AHRRA9YTQ3 701 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 BCL2L11O43521 198 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 DOK2O60496 412 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 FGF2P09038 288 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 TMIGD3P0DMS9 266 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF20P17024 532 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 BMP5P22003 454 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 MAGEB1P43366 347 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
COL12A1-208ENST00000486533 PCK2Q16822 640 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 ODF4Q2M2E3 257 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 ACSF3Q4G176 576 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-208ENST00000486533 RIPPLY2Q5TAB7 128 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 FAAP20Q6NZ36 180 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 FAM122CQ6P4D5 195 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 POMZP3Q6PJE2 187 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 PGAP1Q75T13 922 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 SLC35D2Q76EJ3 337 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 RHOUQ7L0Q8 258 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 LYG2Q86SG7 212 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 YRDCQ86U90 279 aaKnown RBP7.9□□□□□ -1.14
COL12A1-208ENST00000486533 KCNRGQ8N5I3 272 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 OR5T2Q8NGG2 359 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 OR52B4Q8NGK2 314 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 OR5D14Q8NGL3 314 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 OR10AC1Q8NH08 325 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 OR8S1Q8NH09 359 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 ASB10Q8WXI3 467 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 ZBTB8AQ96BR9 441 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms