RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PRTN3P24158 256 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 POLR2IP36954 125 aaKnown RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 MTNR1AP48039 350 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 CXCR4P61073 352 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SNRPGP62308 76 aaKnown RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 RIPPLY1Q0D2K3 151 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 HNRNPA0Q13151 305 aaKnown RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 PRDX4Q13162 271 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 OCLNQ16625 522 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ARMCX4Q5H9R4 360 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SFRP4Q6FHJ7 346 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 ZNF322Q6U7Q0 402 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 ZNF826PQ6ZT77 177 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SLC36A1Q7Z2H8 476 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 WDR86Q86TI4 376 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 FAM90A1Q86YD7 464 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SLC35F2Q8IXU6 374 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 BPIFB2Q8N4F0 458 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ZDHHC22Q8N966 263 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 C8orf46Q8TAG6 207 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ZNF671Q8TAW3 534 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 PIGCQ92535 297 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 RFKQ969G6 155 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 C10orf35Q96D05 121 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 MED30Q96HR3 178 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 RNF170Q96K19 258 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 TECTBQ96PL2 329 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 RAB3IPQ96QF0 476 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 IL4I1Q96RQ9 567 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 PKP2Q99959 881 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 PAPOLGQ9BWT3 736 aaKnown RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 OR51I2Q9H344 312 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 CNTD2Q9H8S5 307 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SEBOXQ9HB31 216 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 ADGRL4Q9HBW9 690 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 CTSZQ9UBR2 303 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 OAZ3Q9UMX2 235 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 SNX5Q9Y5X3 404 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 R4GMQ9 66 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 V9GYS6 101 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 METTL15A6NJ78 407 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 A6NLC8 198 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ZNF850A8MQ14 1090 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 PRR32B1ATL7 298 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ZNF879B4DU55 563 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 C22orf46C9J442 243 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 H3BNX3 289 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 J3QRE1 110 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 DVL1O14640 695 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 FCN3O75636 299 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 NRASP01111 189 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 TTRP02766 147 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 AMY2BP19961 511 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ALDH3A2P51648 485 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 CAV3P56539 151 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 CDC42P60953 191 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ISL1P61371 349 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 GNG3P63215 75 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 PDCD1Q15116 288 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 CLVS2Q5SYC1 327 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 MEDAGQ5VYS4 303 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 STUMQ69YW2 141 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 FDX2Q6P4F2 183 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 METAP1DQ6UB28 335 aaPredicted RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 ZNF788Q6ZQV5 615 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 BCDIN3DQ7Z5W3 292 aaKnown RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 ZDHHC23Q8IYP9 409 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 SCCPDHQ8NBX0 429 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 OR14K1Q8NGZ2 314 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ANGPTL6Q8NI99 470 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 OR51E1Q8TCB6 317 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 NPRL2Q8WTW4 380 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 LRRC29Q8WV35 223 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 HPSE2Q8WWQ2 592 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 PYDC1Q8WXC3 89 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 EME1Q96AY2 570 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 MYCBPQ99417 103 aaPredicted RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 APOL4Q9BPW4 351 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 MS4A7Q9GZW8 240 aaPredicted RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 SEMA6AQ9H2E6 1030 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 PPP1R3EQ9H7J1 279 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 UNKLQ9H9P5 680 aaKnown RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 NOX4Q9NPH5 578 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ESM1Q9NQ30 184 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 GPR84Q9NQS5 396 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 ZNF69Q9UC07 566 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 MRM2Q9UI43 246 aaKnown RBP5.8□□□□□ -1.48
VPS50-218ENST00000485994 ENPP5Q9UJA9 477 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 OR52A1Q9UKL2 312 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS50-218ENST00000485994 PCDHGB1Q9Y5G3 927 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 KPTNQ9Y664 436 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
VPS50-218ENST00000485994 DSCAML1Q8TD84 2053 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 A0A1W2PQL4 384 aaPredicted RBP5.79□□□□□ -1.48
VPS50-218ENST00000485994 hCG_1807616A0A1W2PRN6 198 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 SNTNA6NMZ2 147 aa5.79□□□□□ -1.48
VPS50-218ENST00000485994 ZNF732B4DXR9 585 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms