RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TGM4P49221 684 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 GZMKP49863 264 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 CDK5R1Q15078 307 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ZNF181Q2M3W8 571 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 Q6ZSR3 168 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 EGFL6Q8IUX8 553 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ZFP41Q8N8Y5 198 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 CCDC54Q8NEL0 328 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 OR51A4Q8NGJ6 313 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 OR5AK2Q8NH90 309 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 TRMT10AQ8TBZ6 339 aaKnown RBP9.96□□□□□ -0.82
HPS4-214ENST00000485842 HAVCR2Q8TDQ0 301 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 NPRL2Q8WTW4 380 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 LRRC29Q8WV35 223 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 TSEN15Q8WW01 171 aaKnown RBP9.96□□□□□ -0.82
HPS4-214ENST00000485842 RPL3LQ92901 407 aaKnown RBP9.96□□□□□ -0.82
HPS4-214ENST00000485842 METTL17Q9H7H0 456 aaPredicted RBP9.96□□□□□ -0.82
HPS4-214ENST00000485842 TRIM36Q9NQ86 728 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 PAK1IP1Q9NWT1 392 aaPredicted RBP9.96□□□□□ -0.82
HPS4-214ENST00000485842 BABAM2Q9NXR7 383 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ERVK-18Q9QC07 812 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 PCDHGB5Q9Y5G0 923 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ABCA2Q9BZC7 2435 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PPIAL4EA0A075B759 164 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PNMA8CA0A1B0GUJ8 204 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 OR5B21A6NL26 309 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 TMEM210A6NLX4 147 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PPIAL4DF5H284 164 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 CDIPTO14735 213 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 GATBO75879 557 aaKnown RBP9.95□□□□□ -0.82
HPS4-214ENST00000485842 ISG15P05161 165 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PPIAL4FP0DN26 164 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 EGR1P18146 543 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 WNT4P56705 351 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 GMFBP60983 142 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 LMO4P61968 165 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 GNG3P63215 75 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 CEACAM21Q3KPI0 293 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 CCDC58Q4VC31 144 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 TMEM42Q69YG0 159 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 CYB5R2Q6BCY4 276 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
HPS4-214ENST00000485842 C11orf53Q8IXP5 236 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 MUC20Q8N307 709 aaPredicted RBP9.95□□□□□ -0.82
HPS4-214ENST00000485842 SPICQ8N5J4 248 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 SCCPDHQ8NBX0 429 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 DEFB108BQ8NET1 73 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 RAB39BQ96DA2 213 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 ADAT3Q96EY9 351 aaPredicted RBP9.95□□□□□ -0.82
HPS4-214ENST00000485842 CHST5Q9GZS9 411 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 ZNF665Q9H7R5 613 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 LPAR2Q9HBW0 351 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 YAE1D1Q9NRH1 226 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PCDHB10Q9UN67 800 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 ERGIC3Q9Y282 383 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 PPIAL4AQ9Y536 164 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 SIRT4Q9Y6E7 314 aaPredicted RBP9.95□□□□□ -0.82
HPS4-214ENST00000485842 ABCA1O95477 2261 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 CSPG4Q6UVK1 2322 aa9.95□□□□□ -0.82
HPS4-214ENST00000485842 ZNF469Q96JG9 3925 aaPredicted RBP9.94□□□□□ -0.82
HPS4-214ENST00000485842 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 FAM230AA0A1W2PPH8 454 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 FAM157AC9JC47 383 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 RGS10O43665 173 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 CD5LO43866 347 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 MT-ND2P03891 347 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 CRHBPP24387 322 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 SOX2P48431 317 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 SLC35A2P78381 396 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 SFRP4Q6FHJ7 346 aaPredicted RBP9.94□□□□□ -0.82
HPS4-214ENST00000485842 WDR82Q6UXN9 313 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 KRT74Q7RTS7 529 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 LRRC28Q86X40 367 aaPredicted RBP9.94□□□□□ -0.82
HPS4-214ENST00000485842 GCSAMQ8N6F7 178 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 ZNF485Q8NCK3 441 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 OR5A2Q8NGI9 324 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 OR13C9Q8NGT0 318 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 RGP1Q92546 391 aaPredicted RBP9.94□□□□□ -0.82
HPS4-214ENST00000485842 FGGYQ96C11 551 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
HPS4-214ENST00000485842 SMIM19Q96E16 107 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 CCDC90BQ9GZT6 254 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 TLNRD1Q9H1K6 362 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 SLC7A11Q9UPY5 501 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 DHDHQ9UQ10 334 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 TLN2Q9Y4G6 2542 aa9.94□□□□□ -0.82
HPS4-214ENST00000485842 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 PQLC2LA1A4F0 135 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 CEACAM18A8MTB9 384 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 LGALS8O00214 317 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 RHBDL1O75783 438 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 SERPINA3P01011 423 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 TGFAP01135 160 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 OCM2P0CE71 109 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 OCMP0CE72 109 aaPredicted RBP9.93□□□□□ -0.82
HPS4-214ENST00000485842 RPS2P15880 293 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms