RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SLC25A19Q9HC21 320 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 NOX4Q9NPH5 578 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 PAPOLBQ9NRJ5 636 aaKnown RBP5.14□□□□□ -1.59
PTCD3-215ENST00000484203 KAAG1Q9UBP8 84 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 LAMP5Q9UJQ1 280 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 CR1P17927 2039 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 A0A0U1RQV5 110 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 A0A1B0GUS0 222 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 hCG_1807616A0A1W2PRN6 198 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 TCRBV3S1A0A5B6 114 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 H0YL77 283 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 TRAPPC2LH3BP13 241 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 FKBP6O75344 327 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CYB5R3P00387 301 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CST4P01036 141 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 GYPBP06028 91 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CD80P33681 288 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF121P58317 390 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 RPL15P61313 204 aaKnown RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 FAM3AP98173 230 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 PDCD1Q15116 288 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 SNAPC1Q16533 368 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF829Q3KNS6 432 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 KLHL12Q53G59 568 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 METTL11BQ5VVY1 283 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 TEX36Q5VZQ5 186 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 WDR25Q64LD2 544 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 PLBD1Q6P4A8 553 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 FAM57BQ71RH2 274 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 KRT77Q7Z794 578 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 NAA40Q86UY6 237 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CPOQ8IVL8 374 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CMTM4Q8IZR5 234 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM86BQ8N661 226 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 OR10Z1Q8NGY1 313 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 OR14K1Q8NGZ2 314 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF420Q8TAQ5 688 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 FAM81AQ8TBF8 368 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 NPRL2Q8WTW4 380 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 THEM6Q8WUY1 208 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 DVL3Q92997 716 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 MED30Q96HR3 178 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 FAM71F1Q96KD3 344 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 SLC6A7Q99884 636 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 NUDT16L1Q9BRJ7 211 aaKnown RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 PAPOLGQ9BWT3 736 aaKnown RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 MOB1AQ9H8S9 216 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 MMP26Q9NRE1 261 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 UFSP2Q9NUQ7 469 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 C1orf123Q9NWV4 160 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 DCAF16Q9NXF7 216 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 VNN3Q9NY84 501 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 POMPQ9Y244 141 aa5.13□□□□□ -1.59
PTCD3-215ENST00000484203 CAB39Q9Y376 341 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-215ENST00000484203 hCG_38984A0A1B0GV85 526 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM269A0A1B0GVZ9 245 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 FAM183AA6NL82 134 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 DHRS7CA6NNS2 312 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF879B4DU55 563 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 G3V2T6 193 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ADAM20O43506 726 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CIB2O75838 187 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 LHBP01229 141 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 GRPP07492 148 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CLUP10909 449 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 SLC2A1P11166 492 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ALOX5APP20292 161 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 FASP25445 335 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 PMELP40967 661 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 RPS27P42677 84 aaKnown RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CRISP1P54107 249 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 UBA52P62987 128 aaKnown RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 PAX2Q02962 417 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 PPP1R8Q12972 351 aaKnown RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 BNIP1Q12981 228 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 BAMBIQ13145 260 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TMED1Q13445 227 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 MPPED2Q15777 294 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ATP6AP1Q15904 470 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 SPRNQ5BIV9 151 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 LRRC10Q5BKY1 277 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ATPAF1Q5TC12 328 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 FAHD1Q6P587 224 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 C1orf122Q6ZSJ8 110 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF771Q7L3S4 317 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 KRT74Q7RTS7 529 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 PRSS45Q7RTY3 260 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 GID4Q8IVV7 300 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF679Q8IYX0 411 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CLRN3Q8NCR9 226 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 CCDC54Q8NEL0 328 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 OR1M1Q8NGA1 313 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 OR2AE1Q8NHA4 323 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 OR5K1Q8NHB7 308 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF671Q8TAW3 534 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 TBC1D15Q8TC07 691 aa5.12□□□□□ -1.59
PTCD3-215ENST00000484203 SGK3Q96BR1 496 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms