RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ZNF841Q6ZN19 808 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 NLRC3Q7RTR2 1065 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 SYS1Q8N2H4 156 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 DHRSXQ8N5I4 330 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 TEX29Q8N6K0 151 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 SETD9Q8NE22 299 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 OR8B3Q8NGG8 313 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 OR2G2Q8NGZ5 317 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 LRRC29Q8WV35 223 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 MRPL48Q96GC5 212 aaKnown RBP15.03■□□□□ -0
HDAC6-225ENST00000483506 RNF170Q96K19 258 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 HIST1H2AAQ96QV6 131 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 OR8B2Q96RD0 313 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 SSBP3Q9BWW4 388 aaPredicted RBP15.03■□□□□ -0
HDAC6-225ENST00000483506 METTL17Q9H7H0 456 aaPredicted RBP15.03■□□□□ -0
HDAC6-225ENST00000483506 AMBNQ9NP70 447 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 MYRFQ9Y2G1 1151 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 HSPE1-MOB4S4R3N1 261 aa15.03■□□□□ -0
HDAC6-225ENST00000483506 C3orf80F5H4A9 247 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 H0YAE9 185 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 TRAPPC2LH3BP13 241 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 CLIC3O95833 236 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 NRASP01111 189 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 IFNA2P01563 188 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 UBCP0CG48 685 aaKnown RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 MUC1P15941 1255 aaPredicted RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 CD80P33681 288 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 KIR3DL2P43630 455 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 GPM6AP51674 278 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 CCR9P51686 369 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 KLHL22Q53GT1 634 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 CLVS2Q5SYC1 327 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 FAHD2BQ6P2I3 314 aaPredicted RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 LYPD2Q6UXB3 125 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 C1orf229Q6ZS94 237 aaPredicted RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 FAM90A1Q86YD7 464 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 SCCPDHQ8NBX0 429 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 C19orf18Q8NEA5 215 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 OR52I1Q8NGK6 324 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 CYGBQ8WWM9 190 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 DACT3Q96B18 629 aaPredicted RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 C12orf43Q96C57 262 aaKnown RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 PELI1Q96FA3 418 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 FAHD2AQ96GK7 314 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 ADI1Q9BV57 179 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 ALG8Q9BVK2 526 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 OR51I2Q9H344 312 aa15.02■□□□□ -0
HDAC6-225ENST00000483506 FGF20Q9NP95 211 aaPredicted RBP15.02■□□□□ -0
HDAC6-225ENST00000483506 A0A1B0GVI7 797 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 PHF1O43189 567 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 SYT7O43581 403 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 AVPP01185 164 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 ISG15P05161 165 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 ZNF12P17014 697 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 PITPNBP48739 271 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 NPY4RP50391 375 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 NANOS3P60323 173 aaKnown RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 SMN1Q16637 294 aaKnown RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 CEP78Q5JTW2 689 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 SFRP4Q6FHJ7 346 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 DEFB108BQ8NET1 73 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 RPL3LQ92901 407 aaKnown RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 C10orf35Q96D05 121 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 C4orf36Q96KX1 117 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 MMP26Q9NRE1 261 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 ERVK13-1Q9NX77 482 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 FRRS1LQ9P0K9 344 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 KAAG1Q9UBP8 84 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 CTSZQ9UBR2 303 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 NKX1-2Q9UD57 310 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-225ENST00000483506 INSIG2Q9Y5U4 225 aa15.01□□□□□ -0.01
HDAC6-225ENST00000483506 LOC107986453A0A1B0GWG9 222 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 ZNF732B4DXR9 585 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 CAPGP40121 348 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 GNB2P62879 340 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 SLC34A1Q06495 639 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 MRPL28Q13084 256 aaKnown RBP15□□□□□ -0.01
HDAC6-225ENST00000483506 TMEM244Q5VVB8 128 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 PLCXD3Q63HM9 321 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 WDR25Q64LD2 544 aaPredicted RBP15□□□□□ -0.01
HDAC6-225ENST00000483506 KCTD8Q6ZWB6 473 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 MOB3CQ70IA8 216 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 LHFPL3Q86UP9 236 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 BOLLQ8N9W6 283 aaKnown RBP15□□□□□ -0.01
HDAC6-225ENST00000483506 CNIH3Q8TBE1 160 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 FBLIM1Q8WUP2 373 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 VCXQ9H320 206 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 CLN8Q9UBY8 286 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 OR5V1Q9UGF6 321 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 OPN4Q9UHM6 478 aa15□□□□□ -0.01
HDAC6-225ENST00000483506 PQLC2LA1A4F0 135 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 IRGMA1A4Y4 181 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 ERICH4A6NGS2 130 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 J3QLW9 94 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 FSHBP01225 129 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 HTR1AP08908 422 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 ZNF19P17023 458 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 MICBQ29980 383 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 ODF4Q2M2E3 257 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 C11orf91Q3C1V1 193 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms