RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 BIVMQ86UB2 503 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ZDHHC23Q8IYP9 409 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 FTMTQ8N4E7 242 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 OR6M1Q8NGM8 313 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 SYNPRQ8TBG9 265 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 NPRL2Q8WTW4 380 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 FAM222BQ8WU58 562 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ACOT12Q8WYK0 555 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 AP3S1Q92572 193 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 GTF3AQ92664 365 aaKnown RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 DVL3Q92997 716 aaPredicted RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 FOXRED1Q96CU9 486 aaPredicted RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 RADILQ96JH8 1075 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 WDFY2Q96P53 400 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ABRACLQ9P1F3 81 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 STEAP1Q9UHE8 339 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 KLF2Q9Y5W3 355 aaPredicted RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 ATP23Q9Y6H3 246 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CADP27708 2225 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 FAM230AA0A1W2PPH8 454 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 A0A1W2PPR1 153 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ZSCAN5BA6NJL1 495 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 OR5B21A6NL26 309 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 H0YL77 283 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 TIMM8AO60220 97 aaPredicted RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 HCKP08631 526 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 HTR2CP28335 458 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 GCH1P30793 250 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ETV6P41212 452 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ALDH3B1P43353 468 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 SCAND1P57086 179 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 KLF3P57682 345 aaPredicted RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 DAZAP2Q15038 168 aaPredicted RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 P2RY14Q15391 338 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 RAB11BQ15907 218 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 FAM76BQ5HYJ3 339 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ASCL4Q6XD76 172 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 LHFPL2Q6ZUX7 228 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 C1QL2Q7Z5L3 287 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 CALHM1Q8IU99 346 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 LAX1Q8IWV1 398 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 MFSD4AQ8N468 514 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 JAGN1Q8N5M9 183 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 OR51D1Q8NGF3 324 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 OR5A2Q8NGI9 324 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 TRMT10AQ8TBZ6 339 aaKnown RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 LGALS14Q8TCE9 139 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 SLC25A38Q96DW6 304 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 PIK3IP1Q96FE7 263 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 SORCS2Q96PQ0 1159 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 SYT3Q9BQG1 590 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ADAT1Q9BUB4 502 aaKnown RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 MRI1Q9BV20 369 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 C6orf62Q9GZU0 229 aaPredicted RBP7.02□□□□□ -1.29
USP4-210ENST00000483212 KCNK15Q9H427 330 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 PLGRKTQ9HBL7 147 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 ABCB9Q9NP78 766 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 AKIP1Q9NQ31 210 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 SPATA2Q9UM82 520 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 CMAHPQ9Y471 501 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 RNF115Q9Y4L5 304 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 PEX16Q9Y5Y5 336 aa7.02□□□□□ -1.29
USP4-210ENST00000483212 IGKV1-12A0A0C4DH73 117 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 LOC100289279A0A1B0GTE1 492 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 TMEM272A0A1B0GTI8 110 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 TMEM14DPA8MWL7 114 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 ZNF732B4DXR9 585 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MAGEB3O15480 346 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 HPGDSO60760 199 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 PTBP3O95758 552 aaKnown RBP7.01□□□□□ -1.29
USP4-210ENST00000483212 IGKV1D-12P01611 117 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 EIF4EP06730 217 aaKnown RBP7.01□□□□□ -1.29
USP4-210ENST00000483212 OR4A8P0C604 315 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 VSIG8P0DPA2 414 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 BMP4P12644 408 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MPZP25189 248 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 PTGFRP43088 359 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 POU3F4P49335 361 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 EVX1P49640 407 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 RBP2P50120 134 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MTCP1P56278 107 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MAB21L1Q13394 359 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 UNC119Q13432 240 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 EFNB3Q15768 340 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MST1LQ2TV78 715 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 C2orf76Q3KRA6 126 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 ZNF672Q499Z4 452 aaPredicted RBP7.01□□□□□ -1.29
USP4-210ENST00000483212 CCDC190Q86UF4 302 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 ANGPTL5Q86XS5 388 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 OR5D18Q8NGL1 313 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 RFT1Q96AA3 541 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 FAM3DQ96BQ1 224 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 BORCS8Q96FH0 119 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 RNF170Q96K19 258 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 CMTM3Q96MX0 182 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 SOSTQ9BQB4 213 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 SLC22A4Q9H015 551 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 TLNRD1Q9H1K6 362 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms