RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 SRP9P49458 86 aaKnown RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 GPM6AP51674 278 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 FUT6P51993 359 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 LSM3P62310 102 aaKnown RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 GNG3P63215 75 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 CCL8P80075 99 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 BLMHQ13867 455 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 PCGF3Q3KNV8 242 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 FAM209AQ5JX71 171 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 GDPGP1Q6ZNW5 385 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 OR51A2Q8NGJ7 313 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ITLN1Q8WWA0 313 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 IGFBPL1Q8WX77 278 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 MEGF10Q96KG7 1140 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 OR2V2Q96R30 315 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 EGLN1Q9GZT9 426 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 FGF23Q9GZV9 251 aaPredicted RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 NAA50Q9GZZ1 169 aaKnown RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 SLITRK2Q9H156 845 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 CXorf56Q9H5V9 222 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 DECR2Q9NUI1 292 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 C14orf119Q9NWQ9 140 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 EDARQ9UNE0 448 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 PLEKHA6Q9Y2H5 1048 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ANKRD17O75179 2603 aaKnown RBP10.38□□□□□ -0.75
SDC1-206ENST00000482879 POLQO75417 2590 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 H7C417 338 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 MAGEB3O15480 346 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 GRPP07492 148 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 HCKP08631 526 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 MYL9P24844 172 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 BDKRB2P30411 391 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 THBS2P35442 1172 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 CD200P41217 278 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 SPRNQ5BIV9 151 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 CELF2-AS1Q8N7Q2 184 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 DNAAF1Q8NEP3 725 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 NEU4Q8WWR8 484 aaPredicted RBP10.38□□□□□ -0.75
SDC1-206ENST00000482879 SPSB1Q96BD6 273 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 BORCS8Q96FH0 119 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 KCTD7Q96MP8 289 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 SORCS2Q96PQ0 1159 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 CENPOQ9BU64 300 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 RNF167Q9H6Y7 350 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 TMEM138Q9NPI0 162 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 SNTG1Q9NSN8 517 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
SDC1-206ENST00000482879 TRAV1-2A0A0B4J238 106 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 PQLC2LA1A4F0 135 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 MEGF11A6BM72 1044 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 NCR1O76036 304 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 HPXP02790 462 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 ALDOBP05062 364 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 TNFRSF1AP19438 455 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 RBP2P50120 134 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 ATP1B3P54709 279 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 MTCP1P56278 107 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 TESK1Q15569 626 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 DDI2Q5TDH0 399 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 SLC16A12Q6ZSM3 486 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 WDR86Q86TI4 376 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 LRRTM1Q86UE6 522 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 SPACA5Q96QH8 159 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 SAP30LQ9HAJ7 183 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 UFSP2Q9NUQ7 469 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 UNC79Q9P2D8 2635 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 TANC2Q9HCD6 1990 aa10.37□□□□□ -0.75
SDC1-206ENST00000482879 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 LRP5LA4QPB2 252 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 A6NLC8 198 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 PDCD5O14737 125 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 NDUFS7O75251 213 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 GABARAPO95166 117 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 ADRA2CP18825 462 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 DNASE1P24855 282 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 VBP1P61758 197 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 ZNF154Q13106 437 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 MPPED2Q15777 294 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 RNF144BQ7Z419 303 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 ANGPTL5Q86XS5 388 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 ZNF573Q86YE8 665 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 SCCPDHQ8NBX0 429 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 RFT1Q96AA3 541 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 LURAP1Q96LR2 239 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 GPER1Q99527 375 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 OR51I2Q9H344 312 aa10.36□□□□□ -0.75
SDC1-206ENST00000482879 AK6Q9Y3D8 172 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms