RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SLC30A7Q8NEW0 376 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 TMED6Q8WW62 240 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM100Q9NV29 134 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM218A2RU14 115 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ZFAND5O76080 213 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ATG12O94817 140 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 RPS2P15880 293 aaKnown RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF43P17038 809 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 GLRA1P23415 457 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 DCDP81605 110 aaKnown RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 DOK3Q7L591 496 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM200AQ86VY9 491 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 GTPBP8Q8N3Z3 284 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 FAM89BQ8N5H3 189 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 OR5L2Q8NGL0 311 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 OR51F2Q8NH61 342 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF775Q96BV0 537 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 RASL10BQ96S79 203 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 OSGIN2Q9Y236 505 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 NCOA6Q14686 2063 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 CELA2AP08217 269 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 CD79AP11912 226 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 AMY2BP19961 511 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 PPP1R3BQ86XI6 285 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 BAP18Q8IXM2 172 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 AGBL5Q8NDL9 886 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR56B1Q8NGI3 324 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 AQP7P3A6NL99 342 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 IGLV3-1P01715 115 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 HPNP05981 417 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 FPR2P25090 351 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 CLDN17P56750 224 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 ARFRP1Q13795 201 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 KISS1Q15726 138 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 UBE2V2Q15819 145 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-220ENST00000482507 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR4A4PQ8NGN8 299 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 CRB3Q9BUF7 120 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 SLC39A1Q9NY26 324 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
ATG4B-220ENST00000482507 OR5H15A6NDH6 313 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 TPT1P13693 172 aaKnown RBP13.03□□□□□ -0.32
ATG4B-220ENST00000482507 PTGFRP43088 359 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 SNU13P55769 128 aaKnown RBP13.03□□□□□ -0.32
ATG4B-220ENST00000482507 MST1LQ2TV78 715 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 NKAPLQ5M9Q1 402 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 UQCC3Q6UW78 93 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 FADS6Q8N9I5 356 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 SPACA9Q96E40 222 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-220ENST00000482507 CDC6Q99741 560 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 SLC6A15Q9H2J7 730 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 RAB18Q9NP72 206 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 CHCHD2Q9Y6H1 151 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-220ENST00000482507 EML6Q6ZMW3 1958 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF726A6NNF4 738 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 LRP3O75074 770 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 LYL1P12980 280 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 PRF1P14222 555 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 RAB32Q13637 225 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 PRSS54Q6PEW0 395 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 LDLRAD3Q86YD5 345 aa13.03□□□□□ -0.32
ATG4B-220ENST00000482507 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
ATG4B-220ENST00000482507 IGHV3-15A0A0B4J1V0 119 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 A0A1W2PNU3 283 aaPredicted RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 F5H5K5 113 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 STMND1H3BQB6 276 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 MSTNO14793 375 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 F12P00748 615 aaPredicted RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 NAT2P11245 290 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 FAHP16930 419 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 CYCSP99999 105 aaKnown RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 NAAAQ02083 359 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 IL15RAQ13261 267 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 ENDOGQ14249 297 aaKnown RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF239Q16600 458 aaKnown RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 CCDC36Q8IYA8 594 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 POC1AQ8NBT0 407 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 PGAM5Q96HS1 289 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 TSNAXQ99598 290 aaKnown RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.32
ATG4B-220ENST00000482507 PECRQ9BY49 303 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 SLC26A1Q9H2B4 701 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms