RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ZNF676Q8N7Q3 588 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 OR8B12Q8NGG6 310 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 OR56B2PQ8NGI1 322 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 OR2G2Q8NGZ5 317 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 CCL17Q92583 94 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 GHSRQ92847 366 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 MEGF10Q96KG7 1140 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 YAE1D1Q9NRH1 226 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 FAM206AQ9NX38 181 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF391Q9UJN7 358 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 LOC100506127A0A0U1RQW1 187 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 hCG_38984A0A1B0GV85 526 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 GGT3PA6NGU5 568 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF879B4DU55 563 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 FAM157AC9JC47 383 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 H3BMQ9 156 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PNPP00491 289 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 CD2P06729 351 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 GADD45AP24522 165 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 ACKR3P25106 362 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 SOX6P35712 828 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PSMD7P51665 324 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PSMA6P60900 246 aaKnown RBP10.31□□□□□ -0.76
PTPRF-213ENST00000481019 CTF1Q16619 201 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 DGUOKQ16854 277 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 ZMAT1Q5H9K5 638 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 BCL2L15Q5TBC7 163 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PRAMEF6Q5VXH4 476 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 CROCCP3Q8IVE0 287 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 OR52H1Q8NGJ2 320 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 OR13G1Q8NGZ3 307 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 RPS4Y2Q8TD47 263 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 GPR148Q8TDV2 347 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 REEP6Q96HR9 211 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PGAM5Q96HS1 289 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 DIRC2Q96SL1 478 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 CHCHD6Q9BRQ6 235 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 TMED9Q9BVK6 235 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 EGLN1Q9GZT9 426 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 SLITRK2Q9H156 845 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 GCM1Q9NP62 436 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 IL19Q9UHD0 177 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 OR52A1Q9UKL2 312 aa10.31□□□□□ -0.76
PTPRF-213ENST00000481019 SF3B6Q9Y3B4 125 aaKnown RBP10.31□□□□□ -0.76
PTPRF-213ENST00000481019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.31□□□□□ -0.767e-12■□□□□ 9.8
PTPRF-213ENST00000481019 LOC100289279A0A1B0GTE1 492 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 PNMA8CA0A1B0GUJ8 204 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 XRCC2O43543 280 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM127O75204 238 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF205O95201 554 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 CYB5R3P00387 301 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-213ENST00000481019 LALBAP00709 142 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 ISG15P05161 165 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 PSMB10P40306 273 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 GSK3AP49840 483 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 MPPED2Q15777 294 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 HFEQ30201 348 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 FAM201AQ5SY85 155 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 WDR86Q86TI4 376 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 MOGAT3Q86VF5 341 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 TPRA1Q86W33 373 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 CATSPERDQ86XM0 798 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM203Q969S6 136 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-213ENST00000481019 C1orf159Q96HA4 380 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 FGF23Q9GZV9 251 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-213ENST00000481019 OR51E2Q9H255 320 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 PTTG2Q9NZH5 202 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 FRRS1LQ9P0K9 344 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 NUFIP1Q9UHK0 495 aaKnown RBP10.3□□□□□ -0.76
PTPRF-213ENST00000481019 HHLA2Q9UM44 414 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 GTF2A1LQ9UNN4 478 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
PTPRF-213ENST00000481019 OR4C45A6NMZ5 311 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 CLDN25C9JDP6 229 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 E9PI62 339 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 GABRPO00591 440 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 MTRF1O75570 445 aaKnown RBP10.29□□□□□ -0.76
PTPRF-213ENST00000481019 ZFPL1O95159 310 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 IL1AP01583 271 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 IGHV2-70P01814 119 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 TNFSF4P23510 183 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 CFL1P23528 166 aaKnown RBP10.29□□□□□ -0.76
PTPRF-213ENST00000481019 MYL9P24844 172 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 CNPY1Q3B7I2 92 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 Q499Y3 187 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 ACSM3Q53FZ2 586 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 SLC16A12Q6ZSM3 486 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 CEACAM19Q7Z692 300 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 ELMOD2Q8IZ81 293 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 ZFP41Q8N8Y5 198 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 POM121Q96HA1 1249 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 PGLYRP3Q96LB9 341 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 ADAT1Q9BUB4 502 aaKnown RBP10.29□□□□□ -0.76
PTPRF-213ENST00000481019 PBOV1Q9GZY1 135 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms