RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TGM4P49221 684 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 DEFA6Q01524 100 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 KLRD1Q13241 179 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 PAPD5Q8NDF8 572 aaKnown RBP12.54□□□□□ -0.4
LIMS3-203ENST00000480744 OR10Z1Q8NGY1 313 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
LIMS3-203ENST00000480744 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 FGF23Q9GZV9 251 aaPredicted RBP12.54□□□□□ -0.4
LIMS3-203ENST00000480744 DPAGT1Q9H3H5 408 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 CAB39Q9Y376 341 aaPredicted RBP12.54□□□□□ -0.4
LIMS3-203ENST00000480744 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 A0A1W2PQ09 198 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 BTBD17A6NE02 478 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 PSMD9O00233 223 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 GPR37O15354 613 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 FBP1P09467 338 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 NDUFB7P17568 137 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 PRKACGP22612 351 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 GABRA2P47869 451 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 GPM6AP51674 278 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 HCCSP53701 268 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
LIMS3-203ENST00000480744 SLC35D3Q5M8T2 416 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 ATPAF1Q5TC12 328 aaPredicted RBP12.53□□□□□ -0.4
LIMS3-203ENST00000480744 TMEM236Q5W0B7 351 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 HPSE2Q8WWQ2 592 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 MED30Q96HR3 178 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 GAFA1Q96PS6 74 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 TEX12Q9BXU0 123 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 NIPAL2Q9H841 368 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 SLC25A10Q9UBX3 287 aaPredicted RBP12.53□□□□□ -0.4
LIMS3-203ENST00000480744 WNK1Q9H4A3 2382 aa12.53□□□□□ -0.4
LIMS3-203ENST00000480744 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.4
LIMS3-203ENST00000480744 ZNF816-ZNF321PA0A0X1KG74 233 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 M0QZ24 198 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 EBAG9O00559 213 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 NPFFO15130 113 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 PAHP00439 452 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 MRPL3P09001 348 aaKnown RBP12.52□□□□□ -0.41
LIMS3-203ENST00000480744 ANXA8P13928 327 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 GLRA1P23415 457 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 CDK5Q00535 292 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 APOFQ13790 326 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 DGUOKQ16854 277 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 MIDNQ504T8 468 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 DMRTC1Q5HYR2 192 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 CEP78Q5JTW2 689 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 C1orf146Q5VVC0 180 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 PNKDQ8N490 385 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 Q8N7P7 452 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 LINC01006Q8NI28 216 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 LRTOMTQ8WZ04 291 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 CITED1Q99966 193 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 DNTTIP1Q9H147 329 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 ELL3Q9HB65 397 aaPredicted RBP12.52□□□□□ -0.41
LIMS3-203ENST00000480744 NLKQ9UBE8 527 aa12.52□□□□□ -0.41
LIMS3-203ENST00000480744 OR2AT4A6NND4 320 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF732B4DXR9 585 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 RHBDL1O75783 438 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 ALOX5APP20292 161 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 SLC2A5P22732 501 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 MAP2K3P46734 347 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 TAF9Q16594 264 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 DHRS7BQ6IAN0 325 aaPredicted RBP12.51□□□□□ -0.41
LIMS3-203ENST00000480744 KCTD18Q6PI47 426 aaPredicted RBP12.51□□□□□ -0.41
LIMS3-203ENST00000480744 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
LIMS3-203ENST00000480744 THAP5Q7Z6K1 395 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 TMEM185AQ8NFB2 350 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 ANGPTL6Q8NI99 470 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 DMRTB1Q96MA1 342 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
LIMS3-203ENST00000480744 TMEM269A0A1B0GVZ9 245 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 MEIOCA2RUB1 952 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 TIMM23O14925 209 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 SIGLEC5O15389 551 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 ACAA1P09110 424 aaPredicted RBP12.5□□□□□ -0.41
LIMS3-203ENST00000480744 DCTDP32321 178 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 CAPZA1P52907 286 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 GNG3P63215 75 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 BLMHQ13867 455 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
LIMS3-203ENST00000480744 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 LCN1P1Q5VSP4 162 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 Q6ZSV7 163 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 NPRL2Q8WTW4 380 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms