RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF420Q8TAQ5 688 aaPredicted RBP16.63■□□□□ 0.25
LIME1-205ENST00000480139 RNF170Q96K19 258 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 FGF23Q9GZV9 251 aaPredicted RBP16.63■□□□□ 0.25
LIME1-205ENST00000480139 ZNF281Q9Y2X9 895 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 WIPI2Q9Y4P8 454 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 LRRC42Q9Y546 428 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 NPTNQ9Y639 398 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 IGHV4-61A0A0C4DH41 118 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 IGHV3-64DA0A0J9YX35 117 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 PLPP2O43688 288 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 GRPP07492 148 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 IRF2P14316 349 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 ZNF20P17024 532 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 EEF1B2P24534 225 aaKnown RBP16.62■□□□□ 0.25
LIME1-205ENST00000480139 CHN2P52757 468 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 DOC2BQ14184 412 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 TBCEQ15813 527 aaPredicted RBP16.62■□□□□ 0.25
LIME1-205ENST00000480139 C11orf53Q8IXP5 236 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 GPR148Q8TDV2 347 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 RGP1Q92546 391 aaPredicted RBP16.62■□□□□ 0.25
LIME1-205ENST00000480139 FGGYQ96C11 551 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 ADAT3Q96EY9 351 aaPredicted RBP16.62■□□□□ 0.25
LIME1-205ENST00000480139 PGLYRP3Q96LB9 341 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 CCDC90BQ9GZT6 254 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 UFSP2Q9NUQ7 469 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 DCAF16Q9NXF7 216 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 RNF7Q9UBF6 113 aa16.62■□□□□ 0.25
LIME1-205ENST00000480139 LRP5LA4QPB2 252 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 A6NIN4 97 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 IGHV2-70P01814 119 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 CFHR2P36980 270 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 GPM6AP51674 278 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 YIF1BQ5BJH7 314 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 PARP16Q8N5Y8 322 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 GHSRQ92847 366 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 OR5M11Q96RB7 305 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 ISYNA1Q9NPH2 558 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 GPR173Q9NS66 373 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 C1orf123Q9NWV4 160 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 DHDHQ9UQ10 334 aa16.61■□□□□ 0.25
LIME1-205ENST00000480139 F8P00451 2351 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 PQLC2LA1A4F0 135 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 A6NLC8 198 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 ZNF732B4DXR9 585 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 CYB5R3P00387 301 aaPredicted RBP16.6■□□□□ 0.25
LIME1-205ENST00000480139 INHBBP09529 407 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 BTG1P62324 171 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 CNN3Q15417 329 aaKnown RBP16.6■□□□□ 0.25
LIME1-205ENST00000480139 MED22Q15528 200 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 UBE2V2Q15819 145 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 WDR82Q6UXN9 313 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 KCTD8Q6ZWB6 473 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 ZFP41Q8N8Y5 198 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 TSEN15Q8WW01 171 aaKnown RBP16.6■□□□□ 0.25
LIME1-205ENST00000480139 OR51I2Q9H344 312 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 SLC7A11Q9UPY5 501 aa16.6■□□□□ 0.25
LIME1-205ENST00000480139 ACANP16112 2415 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 ALX3O95076 343 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 LHBP01229 141 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 CELP19835 753 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 MDH2P40926 338 aaKnown RBP16.59■□□□□ 0.25
LIME1-205ENST00000480139 GPR50Q13585 617 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 TMEM155Q4W5P6 130 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 AVPI1Q5T686 147 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 ZNF573Q86YE8 665 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 SERPINA12Q8IW75 414 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 MUC20Q8N307 709 aaPredicted RBP16.59■□□□□ 0.25
LIME1-205ENST00000480139 SCCPDHQ8NBX0 429 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 DNAAF1Q8NEP3 725 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 OR10Z1Q8NGY1 313 aa16.59■□□□□ 0.25
LIME1-205ENST00000480139 YLPM1P49750 1951 aaKnown RBP16.58■□□□□ 0.25
LIME1-205ENST00000480139 TRBV5-5A0A0J9YX44 114 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 CDIPTO14735 213 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 SMAD7O15105 426 aaKnown RBP16.58■□□□□ 0.24
LIME1-205ENST00000480139 CD2P06729 351 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 FUT6P51993 359 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 RPS11P62280 158 aaKnown RBP eCLIP16.58■□□□□ 0.24
LIME1-205ENST00000480139 HNRNPA0Q13151 305 aaKnown RBP16.58■□□□□ 0.24
LIME1-205ENST00000480139 ZMYND11Q15326 602 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 ZNF826PQ6ZT77 177 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 LRRC28Q86X40 367 aaPredicted RBP16.58■□□□□ 0.24
LIME1-205ENST00000480139 SVOPQ8N4V2 548 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 GCSAMQ8N6F7 178 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 OR5D14Q8NGL3 314 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 THRSPQ92748 146 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 RPL3LQ92901 407 aaKnown RBP16.58■□□□□ 0.24
LIME1-205ENST00000480139 SPSB1Q96BD6 273 aa16.58■□□□□ 0.24
LIME1-205ENST00000480139 MED13LQ71F56 2210 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 PPIAL4EA0A075B759 164 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 IGKV1-9A0A0C4DH69 117 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 hCG_1807616A0A1W2PRN6 198 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 PPIAL4DF5H284 164 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 WNT9BO14905 357 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 HEXAP06865 529 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 OCM2P0CE71 109 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 PPIAL4FP0DN26 164 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 ATF1P18846 271 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 PRKACBP22694 351 aa16.57■□□□□ 0.24
LIME1-205ENST00000480139 MAP2K4P45985 399 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms