RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 AIG1Q9NVV5 245 aa9.16□□□□□ -0.94
USP11-208ENST00000480104 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP11-208ENST00000480104 KLK5Q9Y337 293 aaPredicted RBP9.16□□□□□ -0.94
USP11-208ENST00000480104 ADAM18Q9Y3Q7 739 aa9.16□□□□□ -0.94
USP11-208ENST00000480104 CEPT1Q9Y6K0 416 aa9.16□□□□□ -0.94
USP11-208ENST00000480104 TRAV27A0A087WT01 109 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 MAGEA13PA6NCF6 341 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 XKRYO14609 159 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 IGHG2P01859 326 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 SPARCP09486 303 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 ZNF728P0DKX0 622 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 LBPP18428 481 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 GLRA1P23415 457 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 RBM34P42696 430 aaKnown RBP9.15□□□□□ -0.94
USP11-208ENST00000480104 ARHGDIBP52566 201 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 TPTEP56180 551 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 GNG11P61952 73 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 SCARB2Q14108 478 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 DUSP7Q16829 419 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 RFX4Q33E94 735 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 CATSPERDQ86XM0 798 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 LINC00346Q8IVM7 164 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 MICU2Q8IYU8 434 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 C4orf33Q8N1A6 199 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 TMEM239Q8WW34 195 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 Q96M85 177 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 TSPYL1Q9H0U9 437 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 SYT4Q9H2B2 425 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 SP140LQ9H930 580 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 PNRC2Q9NPJ4 139 aaKnown RBP9.15□□□□□ -0.94
USP11-208ENST00000480104 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
USP11-208ENST00000480104 ELANEP08246 267 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
USP11-208ENST00000480104 FASP25445 335 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 GNB1P62873 340 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 AGBL2Q5U5Z8 902 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 OR6V1Q8N148 313 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 CD177Q8N6Q3 437 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
USP11-208ENST00000480104 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 GNB4Q9HAV0 340 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 KRCC1Q9NPI7 259 aaPredicted RBP9.14□□□□□ -0.95
USP11-208ENST00000480104 DPM3Q9P2X0 92 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 GRHPRQ9UBQ7 328 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 A4GNTQ9UNA3 340 aa9.14□□□□□ -0.95
USP11-208ENST00000480104 I3L521 148 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 AHCYL1O43865 530 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
USP11-208ENST00000480104 IL6P05231 212 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 KRT4P19013 534 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 CD247P20963 164 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 DDOSTP39656 456 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 CENPAP49450 140 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP11-208ENST00000480104 FHL1Q13642 323 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 NANOGP8Q6NSW7 305 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 SLC18B1Q6NT16 456 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 MAVSQ7Z434 540 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 OR51A7Q8NH64 312 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 OR5B12Q96R08 314 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 MICU1Q9BPX6 476 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 PAPOLGQ9BWT3 736 aaKnown RBP9.13□□□□□ -0.95
USP11-208ENST00000480104 CLEC7AQ9BXN2 247 aa9.13□□□□□ -0.95
USP11-208ENST00000480104 PAIP1Q9H074 479 aaKnown RBP9.13□□□□□ -0.95
USP11-208ENST00000480104 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 RFPL4AA6NLU0 287 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 RFPL4AL1F8VTS6 287 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 SLC1A7O00341 560 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 ZSCAN12O43309 604 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 MTRF1O75570 445 aaKnown RBP9.12□□□□□ -0.95
USP11-208ENST00000480104 HOXB9P17482 250 aaPredicted RBP9.12□□□□□ -0.95
USP11-208ENST00000480104 SLURP1P55000 103 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.12□□□□□ -0.95
USP11-208ENST00000480104 OGFOD2Q6N063 350 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
USP11-208ENST00000480104 SMARCD3Q6STE5 483 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 ZNF676Q8N7Q3 588 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 ZNF781Q8N8C0 355 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 ZNF570Q96NI8 536 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 RTL8AQ9BWD3 113 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 FGF23Q9GZV9 251 aaPredicted RBP9.12□□□□□ -0.95
USP11-208ENST00000480104 NUAK2Q9H093 628 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 OPA3Q9H6K4 179 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 WDR55Q9H6Y2 383 aaPredicted RBP9.12□□□□□ -0.95
USP11-208ENST00000480104 ACTR3BQ9P1U1 418 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 MED31Q9Y3C7 131 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 SESN1Q9Y6P5 492 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
USP11-208ENST00000480104 TMEM210A6NLX4 147 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 RIPK2O43353 540 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 OR8U9P0C7N5 309 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 SLC2A1P11166 492 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 DCTDP32321 178 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 SLC9A3P48764 834 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 RUNX1Q01196 453 aa9.11□□□□□ -0.95
USP11-208ENST00000480104 MFGE8Q08431 387 aaPredicted RBP9.11□□□□□ -0.95
USP11-208ENST00000480104 KRR1Q13601 381 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms