RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 C11orf44Q8N8P7 122 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 SDR9C7Q8NEX9 313 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 LRRC29Q8WV35 223 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 H1FXQ92522 213 aaKnown RBP8.48□□□□□ -1.05
SMURF1-204ENST00000480055 SLC29A1Q99808 456 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 COPS4Q9BT78 406 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 ZNRD1Q9P1U0 126 aa8.48□□□□□ -1.05
SMURF1-204ENST00000480055 A0A087WXM4 84 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 A0A1B0GW55 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 H0YAE9 185 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 ARPC2O15144 300 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 TBX1O43435 398 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 GMNNO75496 209 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 TSPAN9O75954 239 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DIRAS1O95057 198 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 PTBP3O95758 552 aaKnown RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OPN1MWP04001 364 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L2P0CJ85 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L3P0CJ86 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L4P0CJ87 422 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L5P0CJ88 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L6P0CJ89 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L7P0CJ90 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OPN1MW2P0DN77 364 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OPN1MW3P0DN78 364 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 RHCEP18577 417 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 POU1F1P28069 291 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 RPS27P42677 84 aaKnown RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 GMFBP60983 142 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 HERPUD1Q15011 391 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 LRRC10Q5BKY1 277 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 SLC35F1Q5T1Q4 408 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 TEX36Q5VZQ5 186 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4L9Q6RFH8 374 aaPredicted RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DPY19L4Q7Z388 723 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 AMIGO2Q86SJ2 522 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 FAM216BQ8N7L0 139 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DRAXINQ8NBI3 349 aaPredicted RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 PROKR2Q8NFJ6 384 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OR56B2PQ8NGI1 322 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OR4C15Q8NGM1 316 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OR5R1Q8NH85 324 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 MAP6Q96JE9 813 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 KCTD14Q9BQ13 255 aaPredicted RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OR52D1Q9H346 318 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 PNRC2Q9NPJ4 139 aaKnown RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 CENPMQ9NSP4 180 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 KAAG1Q9UBP8 84 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 DUX4Q9UBX2 424 aa8.47□□□□□ -1.05
SMURF1-204ENST00000480055 RSL24D1Q9UHA3 163 aaKnown RBP8.47□□□□□ -1.05
SMURF1-204ENST00000480055 OR6C68A6NDL8 312 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 TVP23AA6NH52 213 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 ARPC3O15145 178 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 FCN3O75636 299 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 TIPRLO75663 272 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 LHBP01229 141 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 SLC2A1P11166 492 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 MUC1P15941 1255 aaPredicted RBP8.46□□□□□ -1.06
SMURF1-204ENST00000480055 PYCR1P32322 319 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 NAA10P41227 235 aaPredicted RBP8.46□□□□□ -1.06
SMURF1-204ENST00000480055 GSK3BP49841 420 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 PRKXP51817 358 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 DLX1P56177 255 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMURF1-204ENST00000480055 KLRD1Q13241 179 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 PCK2Q16822 640 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 WDR38Q5JTN6 314 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 DRAM2Q6UX65 266 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 C1orf122Q6ZSJ8 110 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 PNKDQ8N490 385 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 LY6G5BQ8NDX9 201 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 MRAPQ8TCY5 172 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 CIB1Q99828 191 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 ADI1Q9BV57 179 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 MRPL22Q9NWU5 206 aaKnown RBP8.46□□□□□ -1.06
SMURF1-204ENST00000480055 NDUFAF4Q9P032 175 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 FBLN5Q9UBX5 448 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 MAGEL2Q9UJ55 1249 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 KCNG2Q9UJ96 466 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 FOXJ3Q9UPW0 622 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.06
SMURF1-204ENST00000480055 A0A1W2PQ09 198 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 NKX6-3A6NJ46 265 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 RNASEK-C17orf49H0YIS7 233 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 XRCC2O43543 280 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 IDH3BO43837 385 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 GADD45GO95257 159 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 ANXA2P07355 339 aaKnown RBP8.45□□□□□ -1.06
SMURF1-204ENST00000480055 SPARCP09486 303 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 VSIG10L2P0DP72 767 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 ATP6V1B1P15313 513 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 JUNBP17275 347 aaPredicted RBP8.45□□□□□ -1.06
SMURF1-204ENST00000480055 NDUFB7P17568 137 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 SAA4P35542 130 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 GNALP38405 381 aa8.45□□□□□ -1.06
SMURF1-204ENST00000480055 IFNGR2P38484 337 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms