RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 EXT1Q16394 746 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 PRAMEF20Q5VT98 475 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 SAT2Q96F10 170 aaPredicted RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 MMP26Q9NRE1 261 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 PCDHB16Q9NRJ7 776 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 RYDENQ9NUL5 291 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 SLC39A1Q9NY26 324 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 C14orf166Q9Y224 244 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 NPIPA2E9PIF3 369 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 NPIPA3F8WFD2 350 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 CSTBP04080 98 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 EIF5AL1Q6IS14 154 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 C1QL2Q7Z5L3 287 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 SAP25Q8TEE9 199 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 SPTSSAQ969W0 71 aa21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 CARHSP1Q9Y2V2 147 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-206ENST00000479510 F5H5K5 113 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 SIGLEC6O43699 453 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 FAM157CP0CG43 387 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 FCGR2AP12318 317 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 OR9K2Q8NGE7 335 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 CPNE2Q96FN4 548 aaPredicted RBP21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 LIN37Q96GY3 246 aaPredicted RBP21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 TSNAXQ99598 290 aaKnown RBP21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 ZNF700Q9H0M5 742 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 EDARQ9UNE0 448 aa21.58■■□□□ 1.05
SYNGAP1-206ENST00000479510 LIFP15018 202 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 IL32P24001 234 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZNF585AQ6P3V2 769 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 PAQR8Q8TEZ7 354 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 OR10C1Q96KK4 312 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 C1orf123Q9NWV4 160 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 OR5AC2Q9NZP5 309 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 PIGLQ9Y2B2 252 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 C5orf63A6NC05 138 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 M0R135 149 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 IFNA2P01563 188 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 CD63P08962 238 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 H2AFB1P0C5Y9 115 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 SERPINA2P20848 420 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 GLRA1P23415 457 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 RSPO1Q2MKA7 263 aaPredicted RBP21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 PHYHD1Q5SRE7 291 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 SPSB1Q96BD6 273 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZNF799Q96GE5 643 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 IMMP1LQ96LU5 166 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 DECR2Q9NUI1 292 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 LPAR3Q9UBY5 353 aa21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZNF629Q9UEG4 869 aaPredicted RBP21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 FOXD3Q9UJU5 478 aaPredicted RBP21.57■■□□□ 1.04
SYNGAP1-206ENST00000479510 CABIN1Q9Y6J0 2220 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 IGHV1-45A0A0A0MS14 117 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 OR5H15A6NDH6 313 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 FAM74A7A6NL05 159 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 SDCBPO00560 298 aaPredicted RBP21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 KCNAB3O43448 404 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 DNPH1O43598 174 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 HTR3BO95264 441 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 FAHP16930 419 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 PI3P19957 117 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 MRPS34P82930 218 aaKnown RBP21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 FAM74A3Q4VXF1 159 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 OR5D18Q8NGL1 313 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 M1APQ8TC57 530 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 TMED6Q8WW62 240 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 SLC5A7Q9GZV3 580 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 FAM27BQ5VT28 67 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 LYSMD4Q5XG99 296 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 MAML2Q8IZL2 1156 aaPredicted RBP21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 ADAMTS17Q8TE56 1095 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 ROBO4Q8WZ75 1007 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 CNTNAP3BQ96NU0 1288 aa21.56■■□□□ 1.04
SYNGAP1-206ENST00000479510 MSGN1A6NI15 193 aa21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 CTSDP07339 412 aaPredicted RBP21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 RBMXP38159 391 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 FLI1Q01543 452 aaPredicted RBP21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 C20orf196Q8IYI0 205 aa21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 Q96M66 194 aa21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZNF385AQ96PM9 386 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 SF3B5Q9BWJ5 86 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 SH2D2AQ9NP31 389 aa21.55■■□□□ 1.04
SYNGAP1-206ENST00000479510 GJE1A6NN92 205 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZIC3O60481 467 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 SCRN3Q0VDG4 424 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 PJVKQ0ZLH3 352 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 RAB32Q13637 225 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 SULF2Q8IWU5 870 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 NPRL2Q8WTW4 380 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 PIGQQ9BRB3 760 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 NDRG3Q9UGV2 375 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 HSF4Q9ULV5 492 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 ACTL6AO96019 429 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 PLATP00750 562 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 RAC1P63000 192 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 RAET1LQ5VY80 246 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 PLXDC2Q6UX71 529 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 SMIM8Q96KF7 97 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 ULBP2Q9BZM5 246 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 OCIAD1Q9NX40 245 aa21.54■■□□□ 1.04
SYNGAP1-206ENST00000479510 ASCC3Q8N3C0 2202 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms