RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 C1orf123Q9NWV4 160 aa12.84□□□□□ -0.35
COL16A1-211ENST00000479100 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
COL16A1-211ENST00000479100 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 ISPDA4D126 451 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 LRRC30A6NM36 301 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 DHRS7CA6NNS2 312 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 VWC2LB2RUY7 222 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 OGG1O15527 345 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 CYB5R3P00387 301 aaPredicted RBP12.83□□□□□ -0.36
COL16A1-211ENST00000479100 SERPINA3P01011 423 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
COL16A1-211ENST00000479100 THBS2P35442 1172 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 PMELP40967 661 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 MAP2K4P45985 399 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 GPM6AP51674 278 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 TAS2R43P59537 309 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 Q6ZSR3 168 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 ZNF826PQ6ZT77 177 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 PRSS48Q7RTY5 328 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 WDR86Q86TI4 376 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 BOLLQ8N9W6 283 aaKnown RBP12.83□□□□□ -0.36
COL16A1-211ENST00000479100 OR1M1Q8NGA1 313 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 HPSE2Q8WWQ2 592 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 OR5M11Q96RB7 305 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 DHDHQ9UQ10 334 aa12.83□□□□□ -0.36
COL16A1-211ENST00000479100 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 ZNF732B4DXR9 585 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 IFNL4K9M1U5 179 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 ZNF205O95201 554 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 GATA4P43694 442 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 SOX2P48431 317 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 IRF3Q14653 427 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 SPHARQ15513 63 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 CEACAM21Q3KPI0 293 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 OR5A2Q8NGI9 324 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 TRMT10AQ8TBZ6 339 aaKnown RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 GHSRQ92847 366 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 HPS1Q92902 700 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 ERGIC1Q969X5 290 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 ADAT3Q96EY9 351 aaPredicted RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 YTHDF1Q9BYJ9 559 aaKnown RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
COL16A1-211ENST00000479100 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 WIPI2Q9Y4P8 454 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
COL16A1-211ENST00000479100 DYSFO75923 2080 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 FAM230AA0A1W2PPH8 454 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 LRP5LA4QPB2 252 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 TMEM210A6NLX4 147 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 TMEM178BH3BS89 294 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 GATBO75879 557 aaKnown RBP12.81□□□□□ -0.36
COL16A1-211ENST00000479100 OCM2P0CE71 109 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 OCMP0CE72 109 aaPredicted RBP12.81□□□□□ -0.36
COL16A1-211ENST00000479100 HSMCR30P0CW71 290 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 CELP19835 753 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 GNG3P63215 75 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 ZNF154Q13106 437 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 DOC2BQ14184 412 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 GPR148Q8TDV2 347 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 PP6455Q8WZ26 134 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 RGP1Q92546 391 aaPredicted RBP12.81□□□□□ -0.36
COL16A1-211ENST00000479100 RPL3LQ92901 407 aaKnown RBP12.81□□□□□ -0.36
COL16A1-211ENST00000479100 C10orf35Q96D05 121 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 ZNF281Q9Y2X9 895 aa12.81□□□□□ -0.36
COL16A1-211ENST00000479100 LSM2Q9Y333 95 aaKnown RBP12.81□□□□□ -0.36
COL16A1-211ENST00000479100 OR5B21A6NL26 309 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 CDIPTO14735 213 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 WNT9BO14905 357 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 PTBP3O95758 552 aaKnown RBP12.8□□□□□ -0.36
COL16A1-211ENST00000479100 CHN2P52757 468 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 GMFBP60983 142 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
COL16A1-211ENST00000479100 UBE2V2Q15819 145 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 FAM201AQ5SY85 155 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 OR13C5Q8NGS8 318 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 Q8TCH9 128 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 RPS4Y2Q8TD47 263 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 LRRC29Q8WV35 223 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 CHST5Q9GZS9 411 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 METTL17Q9H7H0 456 aaPredicted RBP12.8□□□□□ -0.36
COL16A1-211ENST00000479100 LRRC42Q9Y546 428 aa12.8□□□□□ -0.36
COL16A1-211ENST00000479100 ATF1P18846 271 aa12.79□□□□□ -0.36
COL16A1-211ENST00000479100 CD80P33681 288 aa12.79□□□□□ -0.36
COL16A1-211ENST00000479100 BTG1P62324 171 aa12.79□□□□□ -0.36
COL16A1-211ENST00000479100 HOXA4Q00056 320 aaPredicted RBP12.79□□□□□ -0.36
COL16A1-211ENST00000479100 BDH1Q02338 343 aa12.79□□□□□ -0.36
COL16A1-211ENST00000479100 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
COL16A1-211ENST00000479100 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms