RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 NIPAL2Q9H841 368 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 RNF121Q9H920 327 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 CALHM2Q9HA72 323 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 FOLH1BQ9HBA9 442 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 PROK2Q9HC23 129 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 MCCC2Q9HCC0 563 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 AMBNQ9NP70 447 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 RPRD1BQ9NQG5 326 aaKnown RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 MRPL39Q9NYK5 338 aaKnown RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 SPRR3Q9UBC9 169 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 ZNF629Q9UEG4 869 aaPredicted RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 KLHL21Q9UJP4 597 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 DIMT1Q9UNQ2 313 aaKnown RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 EXOSC1Q9Y3B2 195 aaKnown RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 MRPS18CQ9Y3D5 142 aaKnown RBP3.54□□□□□ -1.84
AFF4-208ENST00000478588 FAM215AQ9Y5M1 114 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 WIF1Q9Y5W5 379 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 LIPGQ9Y5X9 500 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 SCN3AQ9NY46 2000 aa3.54□□□□□ -1.84
AFF4-208ENST00000478588 ZGRF1Q86YA3 2104 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 SCN2AQ99250 2005 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 A0A0J9YWU9 116 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TRDV1A0A1B0GX56 115 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 A0A1W2PQ09 198 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 NKX2-6A6NCS4 301 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CCDC182A6NF36 153 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TUBAL3A6NHL2 446 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 SNTNA6NMZ2 147 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 B4DXG7 233 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 C5orf58C9J3I9 102 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 EMC8O43402 210 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 XRCC3O43542 346 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TSPAN2O60636 221 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TOXO94900 526 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 MFN2O95140 757 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CDRT1O95170 752 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 DUS4LO95620 317 aaKnown RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 OPN1SWP03999 348 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CRHP06850 196 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CSF3P09919 207 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 HSMCR30P0CW71 290 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CT45A8P0DMV1 189 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CT45A9P0DMV2 189 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CPN1P15169 458 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GSTM3P21266 225 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 MYL9P24844 172 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 DPP4P27487 766 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 FGF9P31371 208 aaPredicted RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 SDC2P34741 201 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 EVI2BP34910 448 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 BMI1P35226 326 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CHI3L1P36222 383 aaPredicted RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 NUP62P37198 522 aaPredicted RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 HAAOP46952 286 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 RFX3P48380 749 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 CRISP3P54108 245 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GNG2P59768 71 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 BTG1P62324 171 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CDK5Q00535 292 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ACSM1Q08AH1 577 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 C17orf67Q0P5P2 114 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 RAB40BQ12829 278 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 HSPB3Q12988 150 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TNK1Q13470 666 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 QPRTQ15274 297 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CARTPTQ16568 116 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 FBXL19-AS1Q494R0 122 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GPAT3Q53EU6 434 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 KLHL26Q53HC5 615 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CT45A2Q5DJT8 189 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 LCN1P1Q5VSP4 162 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 HACD4Q5VWC8 232 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 PRAMEF8Q5VWM4 474 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 PRAMEF7Q5VXH5 474 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 RAET1LQ5VY80 246 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 RTL6Q6ICC9 239 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 OR2A2Q6IF42 318 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 C1orf94Q6P1W5 598 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CD200R1LQ6Q8B3 271 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ARSKQ6UWY0 536 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 TMEM107Q6UX40 140 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ZNF767PQ75MW2 155 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 P4HA3Q7Z4N8 544 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 NANOGNBQ7Z5D8 188 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 YRDCQ86U90 279 aaKnown RBP3.53□□□□□ -1.84
AFF4-208ENST00000478588 STX12Q86Y82 276 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GRAMD2AQ8IUY3 354 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 MISPQ8IVT2 679 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 CDH26Q8IXH8 852 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 PHC2Q8IXK0 858 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ZNF440Q8IYI8 595 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 OR2L13Q8N349 312 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ZNF614Q8N883 585 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 COX18Q8N8Q8 333 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 AQP11Q8NBQ7 271 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 ACBD4Q8NC06 268 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 OR7G2Q8NG99 324 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 GPR32P1Q8NGA4 272 aa3.53□□□□□ -1.84
AFF4-208ENST00000478588 OR52I1Q8NGK6 324 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms