RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DNASE2BQ8WZ79 361 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 HIPK2Q9H2X6 1198 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PTP4A3O75365 173 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PNLIPP16233 465 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 CHATP28329 748 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 C11orf91Q3C1V1 193 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PRAMEF5Q5TYX0 476 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PRAMEF6Q5VXH4 476 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 RGS7BPQ6MZT1 257 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-208ENST00000478423 MRGPREQ86SM8 312 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 CDC20BQ86Y33 519 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 ST8SIA4Q92187 359 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 HAS2Q92819 552 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 LIN37Q96GY3 246 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-208ENST00000478423 BOD1Q96IK1 185 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 OPA3Q9H6K4 179 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 CNTD2Q9H8S5 307 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 C21orf140B9A014 251 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 LRP3O75074 770 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 LYZL6O75951 148 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 PDGFBP01127 241 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-208ENST00000478423 HBE1P02100 147 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 BGLAPP02818 100 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 PDGFAP04085 211 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 M6PRP20645 277 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 AVPR2P30518 371 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM128Q5BJH2 165 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 OR2M3Q8NG83 312 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 PLSCR3Q9NRY6 295 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 MN1Q10571 1320 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-208ENST00000478423 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 SSX4O60224 188 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 NDUFB6O95139 128 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 SMIM10L1P0DMW3 83 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 HIST1H1DP16402 221 aaKnown RBP12.62□□□□□ -0.39
NPHP4-208ENST00000478423 TLE4Q04727 773 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 GPX8Q8TED1 209 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 SMIM10Q96HG1 83 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 TECTBQ96PL2 329 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 CSF2RBP32927 897 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 LRRTM1Q86UE6 522 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 ADPRHL1Q8NDY3 354 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 OR8B12Q8NGG6 310 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 FRZBQ92765 325 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 RAB33BQ9H082 229 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 DFFBO76075 338 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 AQP8O94778 261 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-208ENST00000478423 KCNRGQ8N5I3 272 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 NDRG3Q9UGV2 375 aa12.62□□□□□ -0.39
NPHP4-208ENST00000478423 TERTO14746 1132 aaKnown RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 TPPPO94811 219 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 HPNP05981 417 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 BMP5P22003 454 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 MAGEA5P43359 124 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 ZPLD1Q8TCW7 415 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 A0A1W2PR77 199 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 CA6P23280 308 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 LGALS4P56470 323 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SOX8P57073 446 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 RAB11AP62491 216 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 CPEB3Q8NE35 698 aaKnown RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SLC30A7Q8NEW0 376 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 OR1S2Q8NGQ3 325 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 RNF150Q9ULK6 438 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 BDP1A6H8Y1 2624 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 GREB1Q4ZG55 1949 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 OR3A4PP47883 348 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SCAND1P57086 179 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 LSM6P62312 80 aaKnown RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 C3AR1Q16581 482 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM91Q6ZNR0 172 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 C6orf201Q7Z4U5 140 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 MRPS18AQ9NVS2 196 aaKnown RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF230Q9UIE0 474 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-208ENST00000478423 KCNE5Q9UJ90 142 aa12.61□□□□□ -0.39
NPHP4-208ENST00000478423 ADRA2CP18825 462 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 C1orf87Q8N0U7 546 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF680Q8NEM1 530 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 HPSE2Q8WWQ2 592 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SF3B5Q9BWJ5 86 aaKnown RBP12.6□□□□□ -0.39
NPHP4-208ENST00000478423 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 CYB5BO43169 146 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 GPR12P47775 334 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF92Q03936 586 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms