RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LRRK2Q5S007 2527 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PCNX2A6NKB5 2137 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 MYO7BQ6PIF6 2116 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LAMA1P25391 3075 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LOC102723996A0A087X1L8 192 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 A0A0D9SG52 128 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1B0GTI1 187 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LOC101059948A0A1B0GTJ6 334 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1W2PQM1 296 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM235A6NFC5 223 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 AQP7P3A6NL99 342 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF726A6NNF4 738 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM14DPA8MWL7 114 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 M0QYG6 137 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 RAB27BO00194 218 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 EFNA2O43921 213 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LMX1BO60663 402 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SIX6O95475 246 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 FGF5P12034 268 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A4P12235 298 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF28P17035 718 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF43P17038 809 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 HLA-GP17693 338 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CCL1P22362 96 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CD34P28906 385 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF93P35789 620 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CBX5P45973 191 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 DHPSP49366 369 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 P2RY4P51582 365 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CLDN6P56747 220 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 H2BFSP57053 126 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TAS2R31P59538 309 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 UBE2MP61081 183 aaKnown RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LSM6P62312 80 aaKnown RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 GRB2P62993 217 aaKnown RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 QRFPP83859 136 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SORDQ00796 357 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 DHRS2Q13268 280 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 UNC119Q13432 240 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LY6DQ14210 128 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF345Q14585 488 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ICAM4Q14773 271 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 PNLIPRP3Q17RR3 467 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 C2orf68Q2NKX9 166 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 MOGAT2Q3SYC2 334 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CDNFQ49AH0 187 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ACTBL2Q562R1 376 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 AWAT2Q6E213 333 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR10K2Q6IF99 312 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LIN54Q6MZP7 749 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 FAHD2BQ6P2I3 314 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM65Q6PI78 240 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CORO6Q6QEF8 472 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OPN5Q6U736 354 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 GSG1LQ6UXU4 331 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CFAP77Q6ZQR2 320 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 RFPL4BQ6ZWI9 263 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 DOK3Q7L591 496 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LYG2Q86SG7 212 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TRAPPC6BQ86SZ2 158 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A42Q86VD7 318 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 WDFY1Q8IWB7 410 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 BEST3Q8N1M1 668 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SLC38A9Q8NBW4 561 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ACBD4Q8NC06 268 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CHST4Q8NCG5 386 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CCDC54Q8NEL0 328 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR10G3Q8NGC4 313 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR8B12Q8NGG6 310 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR52N4Q8NGI2 321 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR10S1Q8NGN2 331 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR13C8Q8NGS7 320 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR13C9Q8NGT0 318 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR10R2Q8NGX6 335 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR6K3Q8NGY3 331 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ELP5Q8TE02 316 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SAP25Q8TEE9 199 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 RBPMSQ93062 196 aaKnown RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ADAT3Q96EY9 351 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 FAHD2AQ96GK7 314 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 OR5B2Q96R09 309 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 RASL10BQ96S79 203 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SLC6A7Q99884 636 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 NAA11Q9BSU3 229 aaPredicted RBP4.34□□□□□ -1.71
SF3B6-202ENST00000478050 EMC6Q9BV81 110 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CHST6Q9GZX3 395 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ARL6Q9H0F7 186 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 SEC61A2Q9H9S3 476 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM9BQ9NQ34 198 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 IFT46Q9NQC8 304 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 RDH8Q9NYR8 311 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF224Q9NZL3 707 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 COMMD9Q9P000 198 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 ANAPC10Q9UM13 185 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 NOP16Q9Y3C1 178 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms